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Fig. 7 | BMC Genomics

Fig. 7

From: CRISPR/Cas9-based depletion of 16S ribosomal RNA improves library complexity of single-cell RNA-sequencing in planarians

Fig. 7

DASH treatment benefits clustering and differential expression analysis. A, B UMAP plots of untreated (A) and DASHed (B) samples. Each dot represents a single cell. Cells belonging to cluster 15 (C15) in the DASHed sample are labeled in red. C Bar plot showing numbers of genes that are expressed in at least 25% of cells in the same cluster. Black box indicates the cluster that is unique to the DASHed dataset. D Bar plot shows numbers of differentially expressed (DE) genes across clusters, tested by Wilcoxon Rank Sum test and adjusted by Bonferroni correction. Black box indicates the cluster that is unique to the DASHed dataset

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BMC Genomics

ISSN: 1471-2164

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