A comparison of Oxford nanopore library strategies for bacterial genomics

BMC Genomics

Table 5 Mean and maximum length of reads (bp) and detected tandems per library strategy

Mean and maximum length of reads determined for all mapped and unmapped reads including their tandem repeat length. Matched value in parenthesis represents the actual length (number of nucleotides) that could be mapped to curated genome as reported by Minimap2. Mapped and matched lengths differ because part of a mapped read may only align partially due to sequencing artifact within the read. Unmapped reads do not have matched values because no alignment is produced by Minimap2

ISSN: 1471-2164