Table 1 GWAS results for two heifer traits based on 79 K SNPs
From: Genome-wide association analysis of heifer livability and early first calving in Holstein cattle
Trait | Chr | SNP | Position | P | MAF |
|---|---|---|---|---|---|
Heifer Livability | 5 | BovineHD0500029553 | 102,805,184 | 5.66E-05 | 0.0988 |
8 | BovineHD0800030830 | 101,970,883 | 5.16E-05 | 0.4321 | |
14 | Hapmap25183-BTC-049425 | 5,880,036 | 1.59E-05 | 0.4835 | |
14 | BovineHD1400007185 | 23,060,870 | 3.53E-10 | 0.0011 | |
14 | BovineHD1400007271 | 23,389,588 | 4.16E-05 | 0.0011 | |
14 | BTA-107899-no-rs | 36,267,667 | 4.32E-05 | 0.0020 | |
18 | BovineHD1800007256 | 23,555,637 | 8.14E-05 | 0.3387 | |
22 | ARS-BFGL-NGS-100995 | 5,061,438 | 7.42E-05 | 0.2269 | |
23 | BovineHD2300005239 | 20,146,079 | 9.79E-05 | 0.4162 | |
24 | BTA-57516-no-rs | 20,681,407 | 8.31E-05 | 0.3521 | |
27 | BovineHD2700002926 | 10,675,111 | 6.26E-05 | 0.3911 | |
Early Calving | 1 | Hapmap38109-BTA-36588 | 73,971,461 | 4.95E-06 | 0.1178 |
22 | ARS-BFGL-NGS-67185 | 60,478,622 | 8.48E-06 | 0.0260 | |
23 | BovineHD2300007231 | 26,926,436 | 8.13E-07 | 0.1781 | |
23 | BTA-27247-no-rs | 26,934,192 | 2.07E-06 | 0.4998 | |
23 | BovineHD2300007469 | 27,446,664 | 8.13E-07 | 0.2150 | |
23 | BovineHD2300007953 | 28,526,405 | 2.64E-06 | 0.3401 | |
23 | BovineHD2300008056 | 28,785,343 | 5.63E-06 | 0.4924 | |
23 | BovineHD2300008081 | 28,825,626 | 3.31E-06 | 0.1532 | |
23 | ARS-BFGL-NGS-105563 | 29,018,391 | 1.28E-07 | 0.4395 | |
23 | BovineHD2300008507 | 29,958,908 | 1.61E-06 | 0.4158 | |
23 | ARS-BFGL-NGS-104394 | 30,013,004 | 3.85E-06 | 0.4494 | |
23 | Hapmap36280-SCAFFOLD155216_10397 | 30,176,828 | 3.85E-06 | 0.4495 | |
23 | BovineHD2300008966 | 31,163,980 | 9.45E-07 | 0.1188 |