Table 6 Transposable elements identified in the distal 500 Kb sequence of barley chromosome arms 2H-L, 3H-L and 5H-L

2H-L

Retroelements

715

269,739

53.95

SINEs

-

-

-

LINEs

17

8647

1.73

LTR elements

349

261,092

52.22

Ty1/Copia

170

108,169

21.63

Gypsy/DIRS1

179

152,923

30.58

DNA transposons

16

13,952

2.79

Total

731

283,691

56.74

3H-L

Retroelements

77

87,052

17.41

SINEs

-

-

-

LINEs

-

-

-

LTR elements

77

87,052

17.41

Ty1/Copia

44

53,374

10.67

Gypsy/DIRS1

33

33,678

6.74

DNA transposons

5

4404

0.88

Total

82

91,456

18.29

5H-L

Retroelements

355

158,621

31,71

SINEs

-

-

-

LINEs

1

116

0.0232

LTR elements

177

158,505

31.69

Ty1/Copia

90

85,623

17.12

Gypsy/DIRS1

87

72,882

14.57

DNA transposons

48

21,969

4.39

Total

403

180,590

36.1