Parameter | med | iqr | mean | sd | samples |
---|---|---|---|---|---|
Filter | \(\boldsymbol Q\boldsymbol U\boldsymbol A\boldsymbol L\boldsymbol>\mathbf{30}\)Â Â | ||||
\(N_{SNP}\) | 3559354 | 17756 | 3552025 | 26065 | individual |
 | 1136546 | 0 | 1136546 | 0 | merged |
H | 0.600 | 0.004 | 0.597 | 0.010 | individual |
 | 0.292 | 0.011 | 0.291 | 0.007 | merged |
R | 0.515 | 0.016 | 0.524 | 0.042 | merged |
\(R_{ROH>0.1}\) | 0.517 | 0.041 | 0.525 | 0.031 | merged |
\(R_{ROH>0.2}\) | 0.475 | 0.040 | 0.483 | 0.031 | merged |
Filter | PASS, \(\boldsymbol Q\boldsymbol U\boldsymbol A\boldsymbol L\boldsymbol>\mathbf{30}\boldsymbol,\boldsymbol\;\) \(\boldsymbol F\boldsymbol M\boldsymbol T\boldsymbol/\boldsymbol D\boldsymbol P\boldsymbol U\boldsymbol>\mathbf{10}\)  | ||||
\(N_{SNP}\) | 3243489 | 15740 | 3234556 | 29368 | individual |
 | 1002681 | 0 | 1002681 | 0 | merged |
H | 0.607 | 0.004 | 0.605 | 0.010 | individual |
 | 0.282 | 0.011 | 0.281 | 0.007 | merged |
R | 0.481 | 0.017 | 0.491 | 0.045 | merged |
\(R_{ROH>0.1}\) | 0.519 | 0.043 | 0.524 | 0.030 | merged |
\(R_{ROH>0.2}\) | 0.485 | 0.044 | 0.491 | 0.031 | merged |