Table 1 Basic statistics information of snRNA-seq results
From: Single-nucleus transcriptome sequencing reveals hepatic cell atlas in pigs
Index | DHL | DHBL |
|---|---|---|
Number of Reads | 407,797,286 | 403,918,586 |
Number of cells | 1,355 | 1,171 |
Number of UMI | 4,716,583 | 4,132,025 |
UMI/cells | 3,480.87 | 3,528.63 |
Mitochondrial UMI ratio | 1.28% | 1.28% |
Median UMI Counts per Cell | 3767 | 3934 |
Number of identified genes | 23,402 | 23,120 |
Median Genes per Cell | 1890 | 1902 |
Sample saturation | 89.00% | 91.00% |
Valid Barcodes | 96.90% | 96.90% |
Q30 Bases in Barcode | 95.90% | 95.70% |
Q30 Bases in RNA Read | 90.50% | 88.90% |
Q30 Bases in UMI | 95.00% | 94.30% |
Reads Mapped Confidently to Genome | 91.50% | 92.30% |