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Table 4 Divergence matrix of the 13 mitochondrial protein-coding genes identified in M. amazonicum

From: In silico prospecting of the mtDNA of Macrobrachium amazonicum from transcriptome data

 

M. amazonicum

 

COI

COII

ATP8

ATP6

COIII

ND3

ND5

ND4

ND4L

ND6

Cytb

ND1

ND2

M. rosenbergii AY659990.1

0.19

0.18

0.26

0.22

0.22

0.33

0.26

0.26

0.19

0.33

0.21

0.19

0.29

M. rosenbergii KY865098.1

0.19

0.20

0.28

0.20

0.21

0.26

0.26

0.25

0.18

0.31

0.21

0.20

0.29

M. nipponense HQ830201.1

0.18

0.20

0.26

0.26

0.19

0.27

0.27

0.24

0.19

0.32

0.17

0.21

0.32

M. lanchesteri KM978918.1

0.21

0.21

0.37

0.27

0.22

0.30

0.26

0.23

0.19

0.34

0.22

0.22

0.32

M. bullatum FJ797435.1

0.17

0.20

0.37

0.22

0.19

0.27

0.27

0.25

0.20

0.37

0.21

0.19

0.31

  1. The genes of M. amazoncium were compared with the same genes of the five species of the genus that have a complete mitochondrial genome deposited in GenBank. The regions are in the published mitogenomes of the listed species. The adopted values range from 0 to 1: the closer to 1, the greater the divergence
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BMC Genomics

ISSN: 1471-2164

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