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Table 5 GWAS and annotations of suggestive SNPs for the LR

From: Elucidation of the genetic determination of clutch traits in Chinese local chickens of the Laiwu Black breed

Chr

BP

ALT/REF

Beta

P value

Consequence

Candidate/Nearest gene

PVE

1

173782660

A/G

-5.12

6.4E-07

downstream

SMAD9

6.07%

5

39490051

G/T

-5.79

3.6E-07

intron

SPTLC2

6.33%

  1. Abbreviations: ALT/REF Alternative vs reference allele, Chr Chromosome, BP Physical position, Beta The estimate coefficient
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BMC Genomics

ISSN: 1471-2164

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