Table 1 Putative recombination positions and precision for chromosome 1 in offspring ID-256 and for chromosome 21 in ID-258 based on the full dataset. Also given are the parental origin of the chromosome and the analysis algorithm (PD: proportional difference; CCS: cumulative continuity score)
From: RecView: an interactive R application for locating recombination positions using pedigree data
Offspring | Chromosome | Origin | Algorithm | Scaffold & Orientation | Chromosomal position (bp) | Precision (bp) |
|---|---|---|---|---|---|---|
ID-256 | 1 | Paternal | PD | Contig4 + | 1,675,083 | 216 |
ID-256 | 1 | Paternal | PD | Contig4 + | 30,646,553 | 775 |
ID-256 | 1 | Paternal | PD | Contig108 - | 117,669,883 | 223 |
ID-256 | 1 | Maternal | PD | Contig4 + | 1,496,864 | 268 |
ID-256 | 1 | Maternal | PD | Contig4 + | 36,938,880 | 1754 |
ID-256 | 1 | Paternal | CCS | Contig4 + | 1,674,925 | 216 |
ID-256 | 1 | Paternal | CCS | Contig4 + | 30,641,720 | 775 |
ID-256 | 1 | Paternal | CCS | Contig108 - | 117,669,374 | 223 |
ID-256 | 1 | Maternal | CCS | Contig4 + | 1,492,708 | 268 |
ID-256 | 1 | Maternal | CCS | Contig4 + | 36,936,350 | 1754 |
ID-258 | 21 | Maternal | PD | Contig21 - | 3,062,428 | 309 |
ID-258 | 21 | Maternal | CCS | Contig21 - | 3,059,096 | 309 |