Table 2 Interaction energy values calculated using RNAsubopt between anti-SD sequence and SD sequence upstream of ccdA and ccdB gene across different bacterial species
| Â | ccdA | ccdB | ||
|---|---|---|---|---|
| Â | Putative SD sequence | MFE (kcal/mol) | Putative SD sequence | MFE (kcal/mol) |
Escherichia coli | AAAGAGGT | -6.7 | AGGGACTG | -3.7 |
Klebsiella pneumoniae | TCCGGAGT | -6.1 | AGGGACTG | -3.7 |
Salmonella enterica | AAAGAGGT | -6.7 | AGGAACTG | -3.7 |
Shigella flexneri | AGGTGTAA | -5.8 | CGGAGCCT | -5.8 |