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Fig. 5 | BMC Genomics

Fig. 5

From: Range of chromatin accessibility configurations are permissive of GABAergic fate acquisition in developing mouse brain

Fig. 5

Analysis of the clustering by cell attributes. A. Circosplot, showing, starting from inside: the dendrogram of E14.5 cell clusters (n = 189) based on E14.5 ATAC feature accessibility, the neurotransmitter type per cell (NT), the brain region of origin (Reg.), and cluster numbers. Stacked barplots show the proportion of the cells derived from different brain regions or the proportion of cells of different neurotransmitter identity per cluster. Labelling in text indicates the branching events where a cluster of cells of single cell type or region of origin emerges. NT, neurotransmitter type; Reg, brain region identity. Brain regions: Di + Tel, diencephalon and telencephalon; MB, midbrain; R1, rhombomere 1. GLUT, glutamatergic neurons; GABA, GABAergic neurons; DA, dopaminergic neurons; prog, progenitor cells

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BMC Genomics

ISSN: 1471-2164

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