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Table 2 Evaluation of five coding genes and six noncoding sequences and ability to discriminate species

From: Comparative and phylogenetic analysis of Chiloschista (Orchidaceae) species and DNA barcoding investigation based on plastid genomes

 

ycf1

matK

ccsA

rps15

psbK

psbK–psbI

rpoB–trnCGCA

psaC–rps15

trnEUUC–trnTGGU

accD–psaI

trnNGUU–rpl32

Length of aligned sequence (bp)

6105

1595

996

276

192

688

2048

1017

1846

1230

5158

No. of variable sites (bp)

1605

295

160

48

27

184

663

314

624

289

1034

No. of informative sites (bp)

784

147

90

27

16

72

278

137

259

128

356

No. of species samples

22

22

22

22

22

21

21

16

21

22

20

Species discriminate

95.45%

68.18%

59.09%

45.45%

13.64%

76.19%

71.43%

68.75%

66.67%

40.91%

35.00%