Table 1 Assembly quality statistics
From: Transcriptome profiling of Bergenia purpurascens under cold stress
Sample | Raw reads | Raw bases | Clean reads | Clean bases | Q30 (%) | GC content (%) |
|---|---|---|---|---|---|---|
CK_1 | 48,639,092 | 7,344,502,892 | 46,945,854 | 6,874,791,843 | 93.71 | 45.06 |
CK_2 | 48,016,470 | 7,250,486,970 | 47,033,282 | 6,836,442,585 | 94.40 | 45.05 |
CK_3 | 57,535,484 | 8,687,858,084 | 53,728,440 | 7,835,216,183 | 93.13 | 45.30 |
Cold_1 | 47,733,804 | 7,207,804,404 | 46,555,808 | 6,810,153,024 | 94.04 | 44.70 |
Cold_2 | 46,632,624 | 7,041,526,224 | 45,616,444 | 6,605,959,084 | 94.43 | 44.86 |
Cold_3 | 49,028,750 | 7,403,341,250 | 45,854,314 | 6,730,151,950 | 93.05 | 44.84 |
total | 297,586,224 | 44,935,519,824 | 285,734,142 | 41,692,714,669 | — | — |