Table 1 Plant polypeptide sequences used to collect bHLH sequences. The species, version and database source are given
From: Automatic annotation of the bHLH gene family in plants
Species | Version | Source |
|---|---|---|
Aquilegia coeruela | v3.1 | |
Arabidopsis thaliana | TAIR10 | Phytozome [66] |
Brassica napus | v5 | Brassica napus Genome Browser [71] |
Brassica rapa | v1.2 | Brassicaceae Database [72] |
Camellia sinesis | - | Tea Plant Information Archive [73] |
Citrus grandis | v1.0 | |
Cucumis melo | v3.5.1 | Cucurbit Genomics Database [75] |
Eucalyptus grandis | v2.0 | |
Gossypium hirsutum | “TM-1” genome NAU-NBI_v1.1 | |
Musa acuminata | DH-Pahang v4 | Banana Genome Hub [79] |
Nicotiana tabacum | v4.5 | SolGenomicsNetwork [80] |
Oryza sativa | 7.0 | Rice Genome Annotation Project [81] |
Phaseolus vulgaris | v2.1 | Phytozome [69] |
Physcomitrella patens | JGI v1.1 | Phytozome [69] |
Populus trichocarpa | v1.1 | Phytozome [69] |
Prunus persica | v2.1 | |
Vitis vinifera | v2.1 | |
Zea mays | B73 RefGen_v3 | MaizeGDB [84] |