Table 1 Missing data from Figures S7 and S8 [2]
Transcript ID of reference transcriptome | 0B reads | 1 (2) B reads | 1(2)B/0B | Annotation | Gene/Repeat Type | Log2 ratio |
|---|---|---|---|---|---|---|
Astyanax mexicanus | ||||||
ARA0AAA39YG16EM1.b.am.1 | 727 | 14,308 | 19.68 | novel_gene | Gene | 4.3 |
ARA0AAA100YB14EM1.b.am.1 | 10 | 160 | 16 | Wu | Gene | 4 |
ARA0AAA109YO19EM1.b.am.1 | 9 | 73 | 8.11 | (CAA)n | DNA_repeats | 3.02 |
ARA0AAA114YD18EM2.b.am.1 | 7 | 128 | 18.29 | Dldh | Gene | 4.19 |
ARA0ABA18YP03EM1.b.am.1 | 9 | 63 | 7 | unknown | unknown | 2.81 |
ARA0ABA86YJ16EM1.b.am.1 | 3 | 39 | 13 | (TTGT)n | DNA_repeats | 3.7 |
ARA0ABA110YF05EM1.b.am.1 | 11 | 111 | 10.09 | unknown | unknown | 3.34 |
ARA0AGA13YG24EM1.b.am.1 | 89 | 472 | 5.3 | unknown | unknown | 2.41 |
A. correntinus | ||||||
ARA0AAA7YM13EM1.b.am.1 | 1 | 152 | 152 | (AATA)n | DNA_repeats | 7.25 |
ARA0AAA8YO20EM1.b.am.1 | 102 | 143 | 1.4 | ERV1A-CPo_I-int | DNA_repeats | 0.49 |
ARA0AAA105YI15EM1.b.am.1 | 277 | 1496 | 5.4 | Tars | Gene | 2.43 |
ARA0ABA109YD04EM1.b.am.1 | 311 | 400 | 1.29 | (AAT)n | DNA_repeats | 0.36 |
ARA0AAA27YN14EM1.b.am.1 | 572 | 3585 | 6.27 | unknown | unknown | 2.65 |
ARA0ABA89YC04EM1.b.am.1 | 118 | 933 | 7.91 | unknown | unknown | 2.98 |
ARA0AAA69YE12EM1.b.am.1 | 1005 | 1612 | 1.6 | I-3_DR | DNA_repeats | 0.68 |
ARA0ABA32YK17EM1.b.am.1 | 70 | 376 | 5.37 | unknown | unknown | 2.43 |