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Table 5 The main antibiotic resistance genes encoded by the large inversion fragment

From: Comparative genomics analysis of Streptococcus iniae isolated from Trachinotus ovatus: novel insight into antimicrobial resistance and virulence differentiation

Gene ID of BH15-2

Locus

Gene ID of BH16-24

Locus

Gene name

Annotation

GE000496

524382:525752:

GE001692

1758762:1760132:+

─

MATE family efflux transporter

GE000551

577162:578196:+

GE001637

1705598:1707352:

exp8

putative ABC transporter ATP-binding protein exp8

GE000596

619779:621863:+

GE001592

1662650:1664734:

pbp2B

penicillin-binding protein 2B

GE000620

647867:649018:+

GE001568

1635495:1636646:

─

MFS transporter

GE000700

737844:739064:+

GE001488

1545449:1546669:

─

MFS transporter

Putative metabolite transport protein HI_1104

GE001036

1056918:1058150:+

GE001224

1267295:1268527:

femA

aminoacyltransferase

GE001062

1080994:1083471:

GE001198

1241974:1244451:+

gyrA

DNA gyrase subunit A

GE001142

1160475:1160972:

GE001118

1164473:1164970:+

dfrA

dihydrofolate reductase

GE001150

1168472:1170214:

GE001110

1155231:1156973:+

yheH

probable multidrug resistance ABC transporter ATP-binding/permease protein YheH

GE001151

1170216:1171937:

GE001109

1153508:1155229:+

yheI

probable multidrug resistance ABC transporter ATP-binding/permease protein YheI

GE001155

1176552:1178318:

GE001105

1147127:1148893:+

─

uncharacterized ABC transporter ATP-binding protein TM_0288

GE001156

1178318:1180060:

GE001104

1145385:1147127:+

─

uncharacterized ABC transporter ATP-binding protein MT1311

GE001179

1200176:1201420

GE001081

1124025:1125269:+

macB

macrolide export ATP-binding/permease protein

GE001181

1202164:1203408:

GE001079

1122037:1123281:+

─

HlyD family efflux transporter periplasmic adaptor subunit

GE001242

1265692:1265880

GE001018

1059565:1059753:+

rpoB

DNA-directed RNA polymerase subunit beta

GE001265

1293282:1294205:

GE000995

1031240:1032163:+

lnrL

linearmycin resistance ATP-binding protein LnrL

GE001278

1305545:1307497:

GE000982

1017948:1019900:+

gyrB

DNA gyrase subunit B

GE001318

1347610:1348833:+

GE000942

976612:977835:

femA

aminoacyltransferase

GE001353

1388065:1389714:

GE000907

935731:937380:+

oppA

oligopeptide-binding protein

GE001395

1423485:1424108:

GE000865

901337:901960:+

macB

macrolide export ATP-binding/permease protein

GE001541

1566232:1567062:

GE000719

758383:759213:+

Rv1218c

multidrug efflux system ATP-binding protein Rv1218c

GE001634

1654361:1656568:+

GE000626

668874:671081:

pbp 1 A

penicillin-binding protein 1 A

GE001646

1668281:1670533:

GE000614

654909:657161:+

pbp 2X

penicillin-binding protein 2X

GE001685

1714423:1715214:

GE000575

610228:611019:+

aph

aminoglycoside phosphotransferase

GE001686

1715275:1716309:

GE000574

609133:610167:+

ecsB

multidrug ABC transporter permease