Fig. 5
From: Inferring single-cell copy number profiles through cross-cell segmentation of read counts
Copy number estimation results of DeepCNA on the breast cancer dataset. A previous study [28] has clustered the cells into 4 subpopulations, and we select four cells for comparison including “SRR053611” from D + P subpopulation, “SRR053678” from H clone, “SRR054594” from AA clone, and “SRR054594” from AB clone. Cell “SRR053611” is a diploid cell, and cell “SRR053678” shows hemizygous deletions on multiple chromosomes. Instead, cells “SRR054594” and “SRR054634” have copy number amplifications on most of the chromosomes