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Fig. 2 | BMC Genomics

Fig. 2

From: Comprehensive genome‑wide analysis of the chicken heat shock protein family: identification, genomic organization, and expression profiles in indigenous chicken with highly pathogenic avian influenza infection

Fig. 2

(A) Phylogenetic analysis and gene structures of chicken HSP genes. The unrooted neighbor-joining (NJ) tree was generated in MEGA7 with parameter settings indicated in Fig. 1 and based on full-length amino acid sequences of chicken HSPs. The solid green boxes represent exons, black boxes represent genes up/downstream, and black lines represent introns. (B) Phylogenetic analysis and domain architectures of chicken HSP genes. The unrooted neighbor-joining (NJ) tree was generated in MEGA7 with parameter settings indicated in Fig. 1 and based on full-length amino acid sequences of HSPs in chicken. (C) Conserved motifs of the chicken HSP genes were identified by MEME (http://meme-suite.org/). Grey lines represent non-conserved sequences, and each motif is indicated by a colored box numbered at the bottom. The lengths of the motifs in each protein are proportional

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BMC Genomics

ISSN: 1471-2164

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