Table 2 33 stable QTNs detected in single- and multi-environment modules
From: Genome-wide association study of agronomic traits related to nitrogen use efficiency in Henan wheat
QTN | Chr | Pos(Mb) | Marker | Trait | Environmenta | Times | LOD | r2(%) | Sign | Know QTLs/QTNs/Genes | References |
|---|---|---|---|---|---|---|---|---|---|---|---|
QTN 1 | 1A | 30.18 | AX-109023654 | GYAR | 1, 2, 3, 4, 5 | 5 | 4.10 ~ 116.84 | 0.77 ~ 2.96 | SUG |  |  |
QTN 2 | 2A | 561.28 | AX-108728001 | GYAR | 2, 3 | 2 | 8.24 ~ 16.48 | 1.52 ~ 5.52 | SIG |  |  |
QTN 3 | 2B | 737.87 | AX-111497324 | GYAR | 4, 5 | 2 | 7.49 ~ 158.51 | 1.19 ~ 2.40 | SIG | qGNSR2B.3 | Shi et al.,2022 [27] |
QTN 4 | 2D | 61.28 | AX-109239751 | GYAR | 3, 5 | 2 | 9.76 ~ 161.15 | 0.96 ~ 2.87 | SIG | Kukri_c16477_157 | Zhao et al.,2022 [28] |
QTN 5 | 2D | 495.82 | AX-111924626 | GYAR | 1, 2, 5 | 3 | 11.09 ~ 62.36 | 0.13 ~ 2.81 | SIG |  |  |
QTN 6 | 3B | 795.38 | AX-109501776 | GYAR | 3, 5 | 2 | 4.51 ~ 86.11 | 0.28 ~ 1.32 | SUG |  |  |
QTN 7 | 3D | 515.93 | AX-89699893 | GYAR | 2, 5 | 2 | 6.43 ~ 211.56 | 1.10 ~ 1.63 | SUG | AX-109688668 | Hu et al.,2020 [29] |
QTN 8 | 4A | 659.66 | AX-110542298 | GYAR | 2, 3, 4 | 3 | 9.00 ~ 13.25 | 1.80 ~ 3.92 | SIG |  |  |
QTN 9 | 4B | 657.26 | AX-109412797 | GYAR | 1, 2, 5 | 3 | 5.18 ~ 101.96 | 0.66 ~ 3.20 | SIG | BobWhite_c8266_582 | Zhao et al.,2022 [28] |
QTN 10 | 4D | 22.29 | AX-89605902 | GYAR | 2, 3 | 2 | 15.80 ~ 16.98 | 2.40 ~ 3.63 | SIG | TaGS1.3 | Teng et al.,2022 [30] |
QTN 11 | 5A | 603.61 | AX-109975954 | GYAR | 1, 2, 3, 4, 5 | 5 | 7.86 ~ 51.59 | 0.22 ~ 3.33 | SIG |  |  |
QTN 12 | 5B | 64.56 | AX-110432662 | GYAR | 1, 2, 3, 4 | 4 | 6.79 ~ 9.88 | 2.16 ~ 3.18 | SIG | MQTL5B.5 | Saini et al.,2021 [31] |
QTN 13 | 7B | 498.97 | AX-94561124 | GYAR | 2, 5 | 2 | 12.40 ~ 67.64 | 0.33 ~ 2.71 | SIG |  |  |
QTN 14 | 7B | 615.73 | AX-108742467 | GYAR | 2, 4 | 2 | 11.88 ~ 12.77 | 1.27 ~ 1.54 | SIG |  |  |
QTN 15 | 7D | 572.02 | AX-109531205 | GYAR | 2, 3, 4, 5 | 4 | 7.33 ~ 159.65 | 0.76 ~ 4.56 | SIG |  |  |
QTN 16 | 2A | 43.93 | AX-109315961 | GYAR, EPNR | 1, 2, 3, 4, 5 | 5 | 4.52 ~ 71.48 | 0.38 ~ 4.44 | SUG | Chr2A_SNP_03717 | Lisker et al.,2022 [32] |
QTN 17 | 2B | 52.67 | AX-109992665 | GYAR, EPNR | 1, 4, 5 | 3 | 4.06 ~ 10.31 | 1.27 ~ 4.22 | SUG |  |  |
QTN 18 | 2B | 450.75 | AX-111609432 | GYAR, EPNR | 4, 5 | 3 | 4.16 ~ 154.47 | 0.94 ~ 2.50 | SUG |  |  |
QTN 19 | 2B | 642.83 | AX-109282796 | GYAR, EPNR | 1, 5 | 2 | 3.58 ~ 177.95 | 1.48 ~ 3.23 | SUG |  |  |
QTN 20 | 3B | 376.86 | AX-111689267 | GYAR, EPNR | 1, 2, 3, 4, 5 | 7 | 4.10 ~ 70.38 | 0.40 ~ 4.65 | SIG |  |  |
QTN 21 | 5A | 568.14 | AX-108917610 | GYAR, EPNR | 3, 4, 5 | 4 | 6.07 ~ 192.52 | 1.61 ~ 5.24 | SUG | qGNSR5A.2 | Shi et al.,2022 [27] |
QTN 22 | 7A | 39.86 | AX-110409398 | GYAR, EPNR | 2, 5 | 2 | 4.50 ~ 122.15 | 0.73 ~ 3.85 | SUG |  |  |
QTN 23 | 1D | 54.12 | AX-109204935 | EPNR | 1, 5 | 2 | 11.70 ~ 11.95 | 0.87 ~ 3.43 | SIG |  |  |
QTN 24 | 3A | 1.93 | AX-109519142 | EPNR | 1, 2, 5 | 3 | 7.04 ~ 13.87 | 2.39 ~ 8.34 | SIG | BobWhite_c18256_105 | Zhang et al.,2021 [33] |
QTN 25 | 5A | 452.44 | AX-109874103 | EPNR | 3, 4, 5 | 3 | 3.79 ~ 5.40 | 0.81 ~ 3.98 | SUG | qFsnR5A.2 | Shi et al.,2022 [27] |
QTN 26 | 6D | 463.91 | AX-110242843 | EPNR | 2, 4 | 2 | 6.65 ~ 8.07 | 4.95 ~ 5.77 | SIG |  |  |
QTN 27 | 2A | 100.63 | AX-108992014 | PHR | 2, 4 | 2 | 11.58 ~ 13.30 | 9.17 ~ 11.05 | SIG |  |  |
QTN 28 | 2A | 330.96 | AX-111237121 | PHR | 4, 5 | 2 | 3.20 ~ 10.28 | 2.07 ~ 3.11 | SUG |  |  |
QTN 29 | 3A | 67.37 | AX-110463363 | PHR | 1, 4, 5 | 3 | 8.41 ~ 15.13 | 1.66 ~ 16.59 | SIG |  |  |
QTN 30 | 3D | 608.68 | AX-110061772 | PHR | 2, 4 | 2 | 3.82 ~ 17.35 | 3.66 ~ 13.32 | SIG | AX-109649974 | Hu et al.,2020 [29] |
QTN 31 | 4B | 406.45 | AX-110005628 | PHR | 3, 4 | 2 | 3.33 ~ 6.23 | 3.20 ~ 6.48 | SUG |  |  |
QTN 32 | 4B | 582.56 | AX-111661088 | PHR | 1, 5 | 2 | 6.22 ~ 8.88 | 1.13 ~ 6.46 | SUG |  |  |
QTN 33 | 4D | 485.49 | AX-111684216 | PHR | 4, 5 | 2 | 5.91 ~ 5.95 | 1.11 ~ 5.65 | SUG | MQTL4D.2 | Saini et al.,2021 [31] |