Fig. 2
From: Genome-scale metabolic network model and phenome of solvent-tolerant Pseudomonas putida S12
Metabolic gene clusters and their corresponding metabolic pathways present only in S12 compared to KT2440. A Metabolic gene clusters. (a-e) Gene clusters in the S12 chromosome: catabolism of tricarballylate (a), cynate and carbamate (b), D-serine (c), nicotinonitrile (d), and formamide (e). (f-i) Gene clusters in the pTTS12 plasmid: catabolism of styrene (f), phenylacetate (g), solvent efflux pump (h), and mercury (i). For clarity, the locus tags RPPX_ and PP_ were removed from the locus names of S12 and KT2440, respectively. B Metabolic pathways. Among the reactions mediated by the gene clusters shown in panel A, those specific to S12 are colored in red, and those common to S12 and KT2440 are shown in black. Reactions not associated with the S12-specific gene clusters are colored in grey