Table 3 Substantially conserved motifs of the TGF-β superfamily in scallops. Seven conserved cysteine residues (C) are underlined in motifs 1–4
From: Genome-wide investigation of the TGF-β superfamily in scallops
MEME Motif | Amino Acid Sequence | Length | Pfam Domain |
|---|---|---|---|
1 | WIIAPKGYEAYYCVGECPFPL | 21 | TGF-β |
2 | SVPTPCCVPTKLSPJSLLYFDENENVVLK | 29 | TGF-β |
3 | NRESDICCRRPLYVDFHDIGW | 21 | TGF-β |
4 | PBMVVKSCGCR | 11 | TGF-β |
5 | YAKNAGWETFDVTBAVLKWINS | 21 | - |
6 | ESLNPTNHAIIQSLVHAJTPG | 21 | - |
7 | FFGIDRVPARVIHKSPPQFMIDLYASITEPGGLVKRESPYRADVIRSFPDREWRQQMHFYYNVSYLSEGEKLLAAEFHIFKLNPRPSSEGEQMPSHVIEI | 100 | - |
8 | AVNYGFLVTTTSPSGRHVNGSYVRFAQRKEHHESKQPILVAYTDDGMNRHPSYISPTDENYMQIKKDILKKQRQRMRQFKGKDFRQAIRLLNEREREEDQ | 100 | - |
9 | FBVSSITHSEVVTRAEJRJYKD | 22 | - |
10 | EKYENAQMQSDSPSRRKEEKLRYQDVQEEYGQPERTYSFAKELPADMSSEFENTIYFDMQVAPEKETNKALLWVYINPDDIIDKNMTEIYVYTIDPPGKF | 100 | - |
11 | QNNLFDNKFLDNVDSQQKKEILEAFESSLLNLFSLNARPRPKKDIKIPQYMIDLYKTHTKDPDVLSPNFNIRGKGVGTANTVRSFYHKDAEEHPVQMTGC | 100 | - |
12 | GRDKREMQHEILTLLGLHHRPKPAGHSTTDYSAPRFMLNLYNSITSDGGIVDDGNRPQFDRNVTIENEIEPIEGSDVIMSFVNHAKKIKHLRRQRDRTFY | 100 | - |
13 | MFHTVNLTVLLGVLVCVVLSREVSDGPQNVLLNESVKTLLGFKDEHPRDQVSSPYGVGQEAPKYMLDLYDRFRNSQISKGHLSGNTVRSIHAEIAEVNGE | 100 | - |
14 | SVQRRQKRSIFNNEIPEDPADYDNFHRKFNIPQTHPDILQSRRESRHKISDSRLIPYPDEDRRKNRRNNRKNRKNKRKNRRRKNKNSNLLFPKEWD | 96 | - |
15 | PGEVVTTLRADVKKTHWFKLGIPKQLVENAMLSEDQILRLHVHCRGCGRRVQLVLVHGSRRRRKSKGGKRKGSMRVMQPRKRPKRRLSQTRPFLILHTKV | 100 | - |
16 | PRAKVNMMKLKEQEHIENIKRRVLEKLRLDAPPKLSGPRPALPFKHLHQEYLSDGVDPGRRRRTLPEFYARKKQVLVMGTDVTTECTNRKSTGCYH | 96 | - |
17 | TDPPRGDYYAELLEVISFSEPAESFRDENIIQFKVVRDSQGRKLEVKSANVLVKLRYRRSKKRGRTSCRQKNRRSDVKKKPRRSRCKIIIVLSTVSEDGT | 100 | - |
18 | ENVFHSVSYGEMDIDARPKTRTEPLLVVFSSEYSKNKLHMKERHEMVTHEMDSFDFMGDLNDTQTNQSESNTLQHRFKR | 79 | - |
19 | RDGLFRKRIFLKKNRDVKPEKLGVLGRPGPEYKRPPKVPYF | 41 | - |
20 | DTPHLFALKFQVEWQNGKVKDVALKKFIRHHSMPFLIIYSNDTQNNELDSLENLAEKMHKEKKE | 64 | - |