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Table 1 Summary of putative TF genes in the thermophilic cyanobacteria studied

From: Genome-scale identification and comparative analysis of transcription factors in thermophilic cyanobacteria

Species

Genome Size (Mbp)

No. of CDS

Total No. of TFs

No. of TRs

No. of OCSs

No. of RRs

No. of SFs

Percentage of TFs in proteome

Leptodesmis sichuanensis A121

5.35

4,809

107

51

18

26

12

2.37%

Leptolyngbya sp. JSC-1

7.87

7,423

203

108

40

40

15

2.99%

Leptothermofonsia sichuanensis E412

6.43

5,272

120

58

14

33

15

2.77%

Thermocoleostomius sinensis A174

5.81

5,532

140

72

24

29

15

2.73%

Thermoleptolyngbya sichuanensis A183

5.53

4,402

112

63

19

21

9

3.04%

Thermoleptolyngbya sp. O-77

5.48

4,865

119

63

22

23

11

2.71%

Trichothermofontia sichuanensis B231

4.44

4,352

68

30

10

17

11

1.75%

Synechococcus sp. C9

2.96

3,058

49

27

6

8

8

2.06%

Thermostichus sp. 60AY4M2

3.16

2,622

53

22

9

13

9

2.29%

Thermostichus sp. 63AY4M2

3.09

2,577

55

23

9

14

9

2.48%

Thermostichus sp. 65AY6A5

2.98

2,597

55

24

9

13

9

2.46%

Thermostichus sp. 65AY6Li

2.93

2,632

54

23

8

14

9

2.36%

Thermostichus sp. JA-2-3Ba

3.05

2,862

57

22

10

14

11

2.31%

Thermostichus sp. JA-3-3Ab

2.93

2,760

54

22

9

14

9

2.90%

Thermosynechococcus lividus PCC 6715

2.66

2,815

47

21

7

10

9

1.85%

Thermosynechococcus nakabusensis NK55

2.52

2,233

47

21

6

13

7

2.37%

Thermosynechococcus sichuanensis E542

2.65

2,507

51

25

7

11

8

2.31%

Thermosynechococcus taiwanensis CL-1

2.65

2,465

54

23

8

15

8

2.35%

Thermosynechococcus taiwanensis TA-1

2.66

2,524

53

23

8

14

8

2.30%

Thermosynechococcus vestitus BP-1

2.59

2,475

43

18

6

11

8

1.90%

Thermosynechococcus sp. M46

2.40

2,155

39

20

5

7

7

2.00%

Thermosynechococcus sp. M98

2.40

2,290

43

21

5

10

7

2.10%