Skip to main content

Table 1 Structure of the complete cp genomes of sect. Tuberculata plants

From: Complete chloroplast genomes of 13 species of sect. Tuberculata Chang (Camellia L.): genomic features, comparative analysis, and phylogenetic relationships

 

C.

rhytidophylla

C.

acutiperulata

C.

rhytidocarpa

C.

lipingensis

C.

pyxidiacea

C.

rubimuricata

C.

neriifolia

C.

atuberculata

C.

ilicifolia

C.

zengii

C.

anlungensis

C.

rubituberculata

C.

leyeensis

Genome size (bp)

156,625

156,624

157,048

157,011

156,677

156,631

157,067

157,068

157,067

157,029

156,587

157,044

157,063

GC (%)

37.34

37.33

37.31

37.30

37.33

37.33

37.30

37.31

37.31

37.31

37.33

37.31

37.30

LSC size (bp)

86,227

86,212

86,648

86,732

86,261

86,237

86,675

86,675

86,674

86,630

86,262

86,689

86,661

SSC size (bp)

18,282

18,282

18,282

18,281

18,286

18,276

18,282

18,283

18,283

18,281

18,339

18,279

18,284

IR size (bp)

52,116

52,130

52,118

51,998

52,130

52,118

52,110

52,110

52,110

52,118

51,986

52,076

52,118

GC of LSC (%)

35.37

35.36

35.33

35.32

35.35

35.37

35.31

35.31

35.31

35.33

35.31

35.31

35.31

GC of SSC (%)

30.60

30.59

30.62

30.63

30.62

30.59

30.61

30.61

30.61

30.62

30.60

30.62

30.60

GC of IR (%)

42.95

42.95

42.95

42.96

42.95

42.94

42.96

42.97

42.97

42.95

42.96

42.98

42.96

GC of CDSs (%)

37.55

37.61

37.54

37.53

37.53

37.52

37.61

37.61

37.61

37.61

37.54

37.65

37.55

1st position GC (%)

45.26

45.37

45.23

45.23

45.19

45.34

45.37

45.37

45.37

45.34

45.24

45.42

45.26

2nd position GC (%)

37.97

38.04

37.98

37.94

37.94

37.94

38.04

38.03

38.04

38.04

37.97

38.00

37.97

3rd position GC (%)

29.40

29.43

29.40

29.42

29.43

29.43

29.46

29.43

29.43

29.46

29.40

29.53

29.40

Length of CDSs

79,487

79,500

79,659

79,753

79,767

79,925

79,099

79,161

79,160

79,395

79,671

80,155

80,175

Number of genes

130

130

130

132

132

132

132

132

132

133

134

136

136

Number of CDSs

87

87

87

87

87

87

87

87

87

88

89

91

91

Number of tRNAs

35

35

35

37

37

37

37

37

37

37

37

37

37

Number of rRNAs

8

8

8

8

8

8

8

8

8

8

8

8

8

Genome type

I

I

I

II

II

II

II

II

II

III

IV

In

In