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Fig. 2 | BMC Genomics

Fig. 2

From: Identification of two major QTLs for pod shell thickness in peanut (Arachis hypogaea L.) using BSA-seq analysis

Fig. 2

QTL analysis of the pod shell thickness based on BSA-seq. Manhattan plots were generated to present the squared ED (A) and the distribution of Δ(SNP-index) (B), the distribution of G values (C), and the distribution of - log10(P values) according to Fisher’s exact test (D) on chromosomes. The green/blue and red lines represent 95% and 99% confidence intervals, respectively. The black lines indicate the average values for the four algorithms based on the sliding windows analysis. The significant genomic regions related to PST are indicated by red rectangles

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