Table 1 Chromosome (BTA), region and candidate genes with known function for stayability in different calvings for Nellore cattle

1

65778705–66049468

STXBP5L, POLQ

5,6,8

2

119059784–119392670

ARMC9, B3GNT7, NCL, SNORA75, SNORD20, NMUR1

3

2

135494699–136128479

PADI2, ATP13A2, MFAP2, MFAP2, CROCC, NECAP2, SPATA21, SZRD1, FBXO42, CPLANE2, ARHGEF19, EPHA2, bta-mir-12026-1, FAM131C, HSPB7, SRARP

2

4

34929131–35595146

SEMA3D

2,3

6

13095116–13451538

ALPK1, TIFA, AP1AR, FAM241A

8

6

15000228–15511470

SNORA70, ELOVL6

8

6

40778768–41197646

KCNIP4

2

6

48275442–48798053

2,3,4,5,6,7

6

63473477–64175368

2

6

76329318–76933125

2

6

83689130–84224086

TMPRSS11F, TMPRSS11BNL, NAP1L1, TMPRSS11E, YTHDC1

3

7

5566681–56208813

2

7

40211447–40591774

OR2V1, TRIM7, TRIM41, RACK1, SNORD96, TRIM52, IFI47, ZNF496

3

7

71098162–71429016

6

7

106812603–107087569

FBXL17

3,4,5,6

8

45925570–46251778

C8H9orf135, MAMDC2

4

8

78390507–79466530

AGTPBP1, TBX18, ISCA1, TUT7, NAA35, GOLM1

4,5

9

41317786–41863663

FOXO3, AFG1L

7

9

43384710–43679905

RTN4IP1, CRYBG1, ATG5

6,7

9

58457036–58925654

7SK

5

9

64368103–64791347

4

10

5968117–6301733

2,3,4,5,6

10

46001413–46531091

DAPK2, HERC1, FBXL22, USP3

2

10

58079955–58662249

MYO5C, GNB5, MAPK6, LEO1, TMOD3, TMOD2, LYSMD2, SCG3

2

11

4198343–4625501

TSGA10, C2orf15, LIPT1, MITD1, MRPL30, TXNDC9, EIF5B, REV1, bta-mir-2285ac

6,7

11

53942316–54543001

8

11

82486734–83003817

DDX1, NBAS, SCGB1C1, ODF3, BET1L, RIC8A, SIRT3, PSMD13, COX8B, NLRP6, PGGHG, IFITM5

7

11

14086549–14645715

FAM136A, XDH, SRD5A2, MEMO1

7

11

18254146–18759465

4,5,6

12

60701633–61426462

HTATSF1

5

13

18256450–18625154

CREM, CUL2, PARD3

7

13

30250975–30855161

MINDY3

4

13

72996969–73347371

PKIG, ADA, CCN5, KCNK15, RIMS4, YWHAB, PABPC1L, TOMM34, STK4

4,5

13

75241356–75719626

OCSTAMP, SLC13A3, TP53RK, SLC2A10, EYA2

4

14

30933520–31352050

SGK3, MCMDC2, SNORD87, TCF24, PPP1R42, COPS5, CSPP1 ARFGEF1

3

14

6901852–7286960

bta-mir-30d, bta-mir-30b, ZFAT

3

18

3997169–4337618

7

18

59330771–60424701

ZNF677

8

19

43400368–44351789

DHX8, ETV4, MEOX1, SOST, DUSP3, CFAP97D1, MPP3, CD300LG, MPP2, PPY, PYY, PYY2, NAGS, TMEM101, LSM12, G6PC3, HDAC5, HROB, ASB16, TMUB2, ATXN7L3, UBTF, SLC4A1, RUNDC3A, SLC25A39, GRN, FAM171A2, ITGA2B, GPATCH8, FZD2

7,8

20

25330894–25766537

NDUFS4, FST

6

20

34138855–34826891

8

20

35324767–36014615

FYB1, RICTOR, OSMR, LIFR, EGFLAM

7

20

41696563–42157220

PDZD1, C20H5orf22, DROSHA

8

20

63971737–64281356

SEMA5A,

3

27

21318719–21871062

TUSC3

5,6

28

37535099–37818918

NRG3

8

28

40412640–40627853

GRID1

8