Skip to main content
Fig. 6 | BMC Genomics

Fig. 6

From: Full-length isoform concatenation sequencing to resolve cancer transcriptome complexity

Fig. 6

Detected isoforms supported by at least four or ten Circular Consensus Sequencing “CCS” reads between sample prep methods. The samples include Human Brain Reference RNA mixed with Spike-In RNA Variants “SIRV” prepared with the PacBio Full-Length Isoform Concatemer Sequencing workflow “HBR_SIRV_Con” or prepared with a non-concatemer Iso-Seq workflow “HBR_SIRV_Non”. Upset plot illustrating unique isoforms identified by GFFCompare analysis for the HBR_SIRV_Non and HBR_SIRV_Con sample set with required isoform read support of at least four or ten CCS reads. Dots indicate isoforms unique to the sample, and a line connecting two or more dots indicate isoforms detected in multiple sample replicates. The numbers listed above the bar graphs represent the number of unique isoforms detected for that sample(s)

Back to article page