Fig. 4

Homology modeling and molecular simulation of the TtMYB1 protein. A Homology modeling of the TtMYB1 protein. B Molecular dynamics simulation. Backbone of root mean squared deviation (RMSD) plotted versus time in picoseconds (ps). C Ramachandran plot analysis. A, B, and L regions: most favored residues; a, b, l, and p regions: additional allowed residues; ~a, ~b, ~l, and ~ p regions: generously allowed residues