Table 5 ORF structure of the WMV-IR-BA isolate, and its similarity to some GenBank isolates
Predicted ORF/region | Length nt(aa) | Position(nt) | Identity% | ||
|---|---|---|---|---|---|
Start | Stop | nt | aa | ||
Polyprotein | 3566 (1137) | 1 | 3566 | 96.38% EU660580 | 98.42% UCC70027 |
NIa-VPg | 440 (146) | 1 | 440 | 95.45% EU660580 | 94.52% YP_077274 |
VPg-pro | 729 (243) | 441 | 1169 | 96.57% KC292915 | 97.94% YP_077275 |
NIb | 1551 (517) | 1170 | 2720 | 97.80% D13913.1 | 98.84% UCC70027 |
CP | 843 (283) | 2721 | 3563 | 96.56% AJ579481 | 97.86% AAX89506 |