Table 6 Genomic regions and ORF structure of the CiaRV-IR-BA (the coting-4), and its similarity to selected GenBank isolates
Predicted ORF/region | ORF product | Â | Positions(nt) | Identity% | ||
|---|---|---|---|---|---|---|
Length nt(aa) | Start | Stop | nt | aa | ||
3’UTR |  | 136 | 1 | 136 | 80.88% MT302542 | - |
ORF1 | N | 1347 (448) | 137 | 1483 | 82.82% OP689651.1 | 89.58% QMS92539 |
ORF2 | P | 1326 (441) | 1675 | 3000 | 81.53% MT302544 | 85.52% UYP40104 |
ORF3 | P3 | 570 (189) | 3163 | 3732 | 81.05% MK202584 | 93.12% QMS92551 |
ORF5 | M | 645 (214) | 4278 | 4922 | 81.83% MT302546 | 93.93% QXF30349 |
ORF6 | G | 1560 (519) | 5141 | 6700 | 80.07% MT302546 | 89.21% UYP40108 |
ORF7 | L | 6342 (2113) | 6953 | 13,294 | 81.05% MT302545 | 93.23% UOF75634 |
ORF4 | P4 | 240 (79) | 3749 | 3988 | 72.53% MK202584 | 64.56% UYP40106. |
5’UTR |  | 149 | 13,295 | 13,443 | 91.49%OP689651 |  |