Table 1 Sample metadata for the 22 LSDV genomes sequenced in the study
From: Unravelling the genomic origins of lumpy skin disease virus in recent outbreaks
Sl. No. | State | District | Year | Species | Age | Source of virus | Sample ID |
|---|---|---|---|---|---|---|---|
1. | Ranchi | Ranchi | 2019 | Cow | Adult | Cell infected culture (Vero Cells) | Ranchi 2019 L1 (OR393174) |
2. | Rajasthan | Banswara | 2021 | Cow | Adult | Cell infected culture (Primary lamb testicle cells) | Banswara 2021 L2 (OR393175) |
3. | Gujarat | Surat | 2021 | Cow | Adult | Scab | 1 Surat 2021 N6 (OR393170) |
4. | Gujarat | Surat | 2021 | Cow | Adult | Scab | 2 Surat 2021 N7 (OR393171) |
5. | Gujarat | Jamnagar | 2022 | Cow | Adult | Scab | 1 Jamnagar 2022 N1 (OR393167) |
6. | Gujarat | Jamnagar | 2022 | Cow | Adult | Scab | 2 Jamnagar 2022 N2 (OR393168) |
7. | Gujarat | Jamnagar | 2022 | Cow | Adult | Scab | 3 Jamnagar 2022 N5 (OR393169) |
8. | Gujarat | Anand | 2022 | Cow | Adult | Scab | 1 Anand 2022 N8 (OR393172) |
9. | Gujarat | Anand | 2022 | Cow | Adult | Scab | 2 Anand 2022 N9 (OR393173) |
10. | Rajasthan | Bikaner | 2022 | Camel | Adult | Cell infected culture (Primary lamb testicle cells) | Camel 2022 L3 (OR393176) |
11. | Rajasthan | Jalore | 2022 | Cow | Adult | Cell infected culture (Primary lamb testicle cells) | Jalore 2022 L4 (OR393177) |
12. | Rajasthan | Nohar | 2022 | Cow | Adult | Cell infected culture (Primary lamb testicle cells) | Nohar 2022 L5 (OR393178) |
13. | Maharashtra | Â | 2022 | Cow | Adult | Scab | MH01 2022 (OR903295) |
14. | Maharashtra | Â | 2022 | Cow | Adult | Scab | MH02 2022 (PP025531) |
15. | Maharashtra | Â | 2022 | Cow | Adult | Scab | MH03 2022 (OR886082) |
16. | Maharashtra | Â | 2022 | Cow | Adult | Scab | MH04 2022 (PP034673) |
17. | Karnataka | Raichur | 2020 | Cow | Adult | Cell infected culture (Vero cells) | KA05 2020 (OR602866) |
18. | Karnataka | Bengaluru | 2020 | Cow | Adult | Cell infected culture (Vero cells) | KA06 2020 (OR855670) |
19. | Karnataka | Ramanagara | 2021 | Cow | Adult | Cell infected culture (Vero cells) | KA07 2021 (OR881023) |
20. | Karnataka | Haveri | 2021 | Cow | Adult | Cell infected culture (Vero cells) | KA08 2021 (OR948565) |
21. | Karnataka | Maddur | 2022 | Cow | Adult | Cell infected culture (Vero cells) | KA09 2022 (OR965961) |
22. | West Bengal | Â | 2022 | Cow | Adult | Scab | WB 2022 (OQ427097) |