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Table 2 Distribution of SICER peaks based on genomic features in switchgrass

From: Genome-wide profiling of histone (H3) lysine 4 (K4) tri-methylation (me3) under drought, heat, and combined stresses in switchgrass

 

DT vs. C

DTHT vs. C

DTHT vs. DT

Number of peaks

% of total peaks

Number of peaks

% of total peaks

Number of peaks

% of total peaks

Five_prime_UTR

327

4.45

326

5.01

485

5.68

CDS

720

9.81

947

14.55

995

11.66

Upstream

465

6.33

345

5.3

590

6.91

Intron

435

5.92

352

5.41

437

5.12

Three_prime_UTR

45

0.61

27

0.41

56

0.66

Downstream

384

5.23

309

4.75

452

5.3

Repeat

4,028

54.86

3,446

52.93

4,312

50.52

Intergenic

938

12.78

758

11.64

1,209

14.16

 

7342

 

6510

 

8536

 
  1. The number of peaks and percentage associated with each genomic feature among control, DT, and DTHT is presented
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BMC Genomics

ISSN: 1471-2164

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