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Fig. 3 | BMC Genomics

Fig. 3

From: The genome and transcriptome of the snail Biomphalaria sudanica s.l.: immune gene diversification and highly polymorphic genomic regions in an important African vector of Schistosoma mansoni

Fig. 3

Maximum likelihood tree of the 57 fibrinogen-related proteins (FREPs) identified from Biomphalaria sudanica (bold) in the current study (see Supplementary Table 14) amongst reference sequences for FREPs identified previously from B. glabrata (see Supplementary Table 15) organized within hierarchical orthogroups (HOGs) as determined by Orthofinder [68]. Branch lengths represent the number of substitutions per site. Nodes with bootstrap values > 75 (estimated with 1000 replicates of non-parametric bootstrap) are signified by a red dot on the branch before bipartition. Red stars indicate FREPs with unusual features according to our annotation summarized in Supplementary Table 14, including those containing weak hits for additional immunoglobulin (IgSF) domains (e.g. BSUD.16968), IgSF rearrangements (e.g. BSUD.21927) or containing partial fibrinogen domains (e.g. BSUD.19120)

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BMC Genomics

ISSN: 1471-2164

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