Table 2 Genome statistics from Illumina sequencing (paired end 150 bp) for four Biomphalaria sudanica inbred lines (Bs110, Bs163, Bs5-2 and BsKEMRI) aligned to the ~ 944.2 Mb B. sudanica 111 reference genome (NCBI BioProject: PRJNA1041389)
Biomphalaria sudanica inbred line | NCBI SRA Accessions | Raw total sequences | Paired reads mapped | Bases mapped CIGAR | Coverage | Heterozygous Sites (percentage of genome) | Number of missing sites (percentage of genome) |
|---|---|---|---|---|---|---|---|
Bs110 | SRR26849483 | 174,760,210 | 86,796,593 | 23,247,544,501 | 24.6 | 0.13% | 4.75% |
Bs163 | SRR26849482 | 207,521,490 | 102,626,199 | 27,823,100,537 | 29.4Â | 0.11% | 6.16% |
Bs5-2 | SRR26849484 | 548,701,568 | 272,013,259 | 73,112,262,010 | 77.2 | 0.17% | 3.83% |
BsKEMRI | SRR26849481 | 169,400,086 | 83,924,684 | 22,815,557,212 | 24.1 | 0.21% | 5.31% |