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Table 2 Across trait per variant h2 from model M3 and number of variants for each subset

From: Genomic dissection of the correlation between milk yield and various health traits using functional and evolutionary information about imputed sequence variants of 34,497 German Holstein cows

Subset

across-trait per variant h2

Variants No.

50K

\(3.409*{10}^{-6}\)

44,126

splice sites

\(2.766*{10}^{-6}\)

7,308

mQTL

\(2.304*{10}^{-6}\)

5,179

untranslated regions

\(1.206*{10}^{-6}\)

28,039

noncoding related

\(8.537*{10}^{-7}\)

3,189

young

\(9.663*{10}^{-8}\)

88,195

selection signatures

\(6.171*{10}^{-8}\)

1,138

VD1

\(1.930*{10}^{-8}\)

4,205,241

LD2

\(1.732*{10}^{-8}\)

4,220,653

LD1

\(1.589*{10}^{-8}\)

4,220,680

VD2

\(9.576*{10}^{-9}\)

4,225,644

MAF3

\(8.440*{10}^{-9}\)

4,220,866

LD3

\(7.779*{10}^{-9}\)

4,220,703

coding related

\(7.303*{10}^{-9}\)

68,787

MAF2

\(6.260*{10}^{-9}\)

4,220,702

MAF4

\(5.584*{10}^{-9}\)

4,220,595

VD3

\(4.606*{10}^{-9}\)

4,211,960

geQTL

\(4.552*{10}^{-9}\)

87,955

intergenic

\(2.347*{10}^{-9}\)

8,037,337

VD4

\(2.134*{10}^{-9}\)

4,237,933

Conserved 100

\(1.984*{10}^{-9}\)

240,145

LD4

\(1.551*{10}^{-9}\)

4,220,696

gene end

\(5.099*{10}^{-10}\)

676,873

ChIPseq

\(4.121*{10}^{-10}\)

783,523

sQTL

\(3.068*{10}^{-10}\)

907,930

eeQTL

\(2.268*{10}^{-10}\)

787,213

aseQTL

\(2.027*{10}^{-10}\)

826,089

intron

\(1.666*{10}^{-10}\)

3,071,141