Table 1 List of genes in the plastome of A. carmichaelii

Transcription and translation

Large subunit of ribosome (LSU)

rpl2, rpl14, ψrpl16, rpl20, rpl22, rpl23, rpl33, rpl36

Small subunit of ribosome (SSU)

rps2, rps3, rps4, rps7 (× 2), rps8, rps11, rps12 (× 2), rps14, rps15, rps16, rps18, rps19

RNA polymerase

rpoA, rpoB, rpoC1, rpoC2

Translational initiation factor

InfA

rRNA genes

rrn4.5 (× 2), rrn5 (× 2), rrn16 (× 2), rrn23 (× 2)

tRNA genes

trnA-UGC (× 2), trnC-GCA, trnD-GUC, trnE-UUC, trnF-GAA, trnM-CAU, trnG-GCC, trnG-UCC, trnH GUG, trnI-CAU, trnI-GAU (× 2), trnK-UUU, trnL-CAA (× 2), trnL-UAA, trnL-UAG, trnM-CAU, trnN-GUU(× 2), trnP-UGG, trnQ-UUG, trnR-ACG (× 2), trnR-UCU, trnS-GCU, trnS-GGA, trnS-UGA, trnT GGU, trnT-UGU, trnV-GAC (× 2), trnV-UAC, trnW-CCA,trnY-GUA

Photosynthesis

Photosystem I

psaA, psaB, psaC, psaI, psaJ

Photosystem II

psbA, psbB, psbC, psbD, psbE, psbF, psbH, psbI, psbJ, psbK, psbL, psbM, psbN, psbT, psbZ

NADH oxidoreductase

ndhA, ndhB (× 2), ndhC, ndhD, ndhE, ndhF, ndhG, ndhH, ndhI, ndhJ, ndhK

Cytochrome b6/f complex

petA, petB, petD, petG, petL, petN

ATP synthase

atpA, atpB, atpE, atpF, atpH, atpI

RubiscoCO large subunit

rbcL

ATP-dependent protease subunit gene

clpP

Other genes

Maturase

matK

Envelop membrane protein

cemA

Subunit Acetyl- CoA-Carboxylate

accD

c-type cytochrome synthesis gene

ccsA

Unknown

Conserved Open reading frames

ycf1 (× 2), ycf2 (× 2), ycf3, ycf4, ycf15 (× 2)