Table 2 Statistics of transposable elements in Pse. libanotica genome sequences
Denovo+Repbase Length(bp) | % in Genome | TE proteins Length(bp) | % in Genome | Combined Tes Length(bp) | % in Genome | |
|---|---|---|---|---|---|---|
DNA | 80,757,639 | 2.70 | 49,637,759 | 1.66 | 128,642,083 | 4.30 |
LINE | 2,196,166 | 0.07 | 33,738,564 | 1.13 | 35,319,985 | 1.18 |
SINE | 1,570,054 | 0.05 | 0 | 0 | 1,570,054 | 0.05 |
LTR | 1,952,684,497 | 65.32 | 391,751,832 | 13.1 | 1,977,516,340 | 66.15 |
Unknown | 9,318,886 | 0.31 | 120 | 0.000004 | 9,319,006 | 0.31 |
Total | 2,045,135,021 | 68.41 | 475,109,220 | 15.89 | 2,105,455,067 | 70.43 |