Table 1 The characteristics of Mycobacterium tuberculosis isolates
Characteristic | Number of isolates (%) | |||
|---|---|---|---|---|
Lineage | lineage1 | 851(6.29) | ||
lineage2 | 5135(37.95) | |||
lineage3 | 970(7.17) | |||
lineage4 | 6499(48.03) | |||
lineage5 | 38(0.28) | |||
lineage6 | 10(0.07) | |||
lineage7 | 29(0.21) | |||
12 SNPs | Cluster | 6104(45.11) | ||
No-cluster | 7428(54.89) | |||
Lineage2 | cluster | 2131(41.50) | ||
no-cluster | 3004(58.50) | |||
Lineage4 | cluster | 2971(45.71) | ||
no-cluster | 3528(54.29) | |||
25 SNPs | Clade | 8395(62.04) | ||
No-Clade | 5137(37.96) | |||
Cross-country | Yes | 720(8.58) | ||
No | 7675(91.42) | |||
Cross-regional | Yes | 701(8.35) | ||
No | 7694(91.65) | |||
Clades by size | small | 2732(32.54) | ||
medium | 3519(41.92) | |||
large | 2144(25.54) | |||