The first Cyclospora cayetanensis lineage A genome from an isolate from Mexico

BMC Genomics

Table 3 Comparison of complete and incomplete protein-coding genes among gene predictions in C. cayetanensis isolate USDA_Mex32 de novo assembly, USDA_Mex32 re-scaffolded assembly, and the annotated assembly GCA_002999335.1

	USDA_Mex32 de novo assembly	USDA_Mex32 re-scaffolded assembly	GCA_002999335.1 assembly*
Incomplete protein-coding genes	1,853	257	385
Complete protein-coding genes	5,551	6,367	5,408
% complete	75.0	96.1	93.4

* Gene predictions were not performed on the reference assembly in this study. These counts were extracted from the official annotation release GFF file of the GCA_002999335.1 assembly where annotations were generated by the NCBI Eukaryotic Genome Annotation Pipeline [20]

ISSN: 1471-2164