Table 2 Comparison of the Leguminivora glycinivorella genome assembly to those from Tortricid moths (Lepidoptera: Tortricidae). Completeness assessed using the Benchmarking Universal Single-Copy Orthologs (BUSCO) against the lepidoptera_odb10. Set of 5,286 orthologs
| Â | Assemblies of tortricid moth species | |||||
|---|---|---|---|---|---|---|
Statistics | ilLegGlyc1.0 | ilLegGlyc1.1 | ilCydSple1.2 | PamFasc1.1 | NotUddm1.1 | ApoTurb1.1 |
Contig or scaffold no | 225 | 40 | 112 | 34 | 49 | 44 |
Chromosomes | Na | 27 + Z | 27 + Z | 27 + Z | 27 + Z | 27 + Z |
Length (Mb) | 657.4 | 657.4 | 630.62 | 564.4 | 794.12 | 720.47 |
N50 (Mb) | 4.2 | 25.3 | 22.1 | 20.7 | 30.0 | 27.1 |
L50 | 49 | 11 | 12 | 11 | 11 | 11 |
N90 (Mb) | 148 | 15.1 | 26 | 24 | 23 | 24 |
L90 | 1.6 | 23 | 11.6 | 13.0 | 17.7 | 16.5 |
Longest (Mb) | 37.6 | 55.4 | 49.8 | 46.7 | 75.7 | 61.5 |
BUSCOs | LegGlyc1.0 | LegGlyc1.1 | CydSple1.1 | PamFasc1.1 | NotUddm1.1 | ApoTurb1.1 |
Complete © | 4912; 92.2% | 4914; 93.0% | 5167; 97.8% | 5189; 98.2% | 5197; 98.3% | 5194; 98.2% |
Complete single-copy (S) | 4812; 91.0% | 4837; 91.5% | 5136; 97.2% | 5143; 97.3% | 5159; 97.6% | 5156; 97.5% |
Complete duplicated (D) | 100; 1.9% | 77; 1.5% | 31; 0.6% | 46; 0.9% | 38; 0.7% | 38; 0.7% |
Fragmented BUSCOs (F) | 44; 0.8% | 43; 0.8% | 31; 0.6% | 27; 0.5% | 26; 0.5% | 25; 0.5% |
Missing BUSCOs (M) | 330; 6.3% | 329; 6.2% | 88; 1.6% | 70; 1.3% | 63; 1.2% | 67; 1.3% |
Total BUSCO searched | 5286; 100% | 5286; 100% | 5286; 100% | 5286; 100% | 5286; 100% | 5286; 100% |