Fig. 1
From: Analysis and prediction of interactions between transmembrane and non-transmembrane proteins
Workflow of SeqTMPPI. a Sequence of the transmembrane protein and non-transmembrane protein. b The first step is to pad each protein sequence to the same length (2,000), then, encode the protein sequence as a vector by the One-Hot strategy and concatenate the proteins in a pair linearly. c Finally, a CNN model with a GAP layer was applied to learn the pair-wise pattern of the concatenated sequence to predict interactions betweenTMP and nonTMP