Fig. 3
From: Detection and classification of the integrative conjugative elements of Lactococcus lactis
Example of the composition for the selected core lactococcal ICE genes (L.ICE_CGs). A In dark blue the 5 core ICE functions used for the initial detection, in red the core L. lactis ICE genes and in light blue the variable genes. B Gene table for KF147_2 and the assigned identifiers. The identifiers are taken from literature nomenclature of MPFFA type systems, in order to allow future comparisons and easier access. The identifiers describe as followed: tcpA = coupling protein, mobT = relaxase, tcpC and tcpE two MPF associated genes, virB4 = ATPase function, int = integrase. The listed locus tags (first column) refer to the standardized locus tag numbering in the NCBI database, which differ from those in the original genome assembly, to facilitate their correspondence we provide the original locus tags for the first and last gene: LLKF_RS11295 = LLKF_2255, and LLKF_11180 = LLKF_2229