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Volume 19 Supplement 10

Proceedings of the 29th International Conference on Genome Informatics (GIW 2018): genomics

Research

Publication of this supplement has not been supported by sponsorship. Information about the source of funding for publication charges can be found in the individual articles. The articles have undergone the journal's standard peer review process for supplements. YZ was not involved in the review of their own authored paper. The Supplement Editors declare that they have no other competing interests.

Yunnan, China3-5 December 2018

Edited by Yun Zheng and Jinyan Li

  1. Content type: Research

    NGS data contains many machine-induced errors. The most advanced methods for the error correction heavily depend on the selection of solid k-mers. A solid k-mer is a k-mer frequently occurring in NGS reads. The o...

    Authors: Liang Zhao, Jin Xie, Lin Bai, Wen Chen, Mingju Wang, Zhonglei Zhang, Yiqi Wang, Zhe Zhao and Jinyan Li

    Citation: BMC Genomics 2018 19(Suppl 10):912

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  2. Content type: Research

    Interactions among transcription factors (TFs) and histone modifications (HMs) play an important role in the precise regulation of gene expression. The context specificity of those interactions and further its...

    Authors: Lirong Zhang, Gaogao Xue, Junjie Liu, Qianzhong Li and Yong Wang

    Citation: BMC Genomics 2018 19(Suppl 10):914

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  3. Content type: Research

    Soil salinity is one of the primary causes of yield decline in rice. Pokkali (Pok) is a highly salt-tolerant landrace, whereas IR29 is a salt-sensitive but widely cultivated genotype. Comparative analysis of t...

    Authors: Yong-Fang Li, Yun Zheng, Lakshminarayana R. Vemireddy, Sanjib Kumar Panda, Smitha Jose, Alok Ranjan, Piyalee Panda, Ganesan Govindan, Junxia Cui, Kangning Wei, Mahmoud W. Yaish, Gnanambal Charmaine Naidoo and Ramanjulu Sunkar

    Citation: BMC Genomics 2018 19(Suppl 10):935

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  4. Content type: Research

    Alfalfa (Medicago sativa L.) is a forage legume with significant agricultural value worldwide. MicroRNAs (miRNAs) are key components of post-transcriptional gene regulation and essentially regulate many aspects o...

    Authors: Robert Pokoo, Shuchao Ren, Qingyi Wang, Christy M. Motes, Timothy D. Hernandez, Sayvan Ahmadi, Maria J. Monteros, Yun Zheng and Ramanjulu Sunkar

    Citation: BMC Genomics 2018 19(Suppl 10):913

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  5. Content type: Research

    Species of Paris Sect. Marmorata are valuable medicinal plants to synthesize steroidal saponins with effective pharmacological therapy. However, the wild resources of the species are threatened by plundering expl...

    Authors: Xiaoyang Gao, Xuan Zhang, Honghu Meng, Jing Li, Di Zhang and Changning Liu

    Citation: BMC Genomics 2018 19(Suppl 10):878

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  6. Content type: Research

    The evolution of influenza A viruses leads to the antigenic changes. Serological diagnosis of the antigenicity is usually labor-intensive, time-consuming and not suitable for early-stage detection. Computation...

    Authors: Xinrui Zhou, Rui Yin, Chee-Keong Kwoh and Jie Zheng

    Citation: BMC Genomics 2018 19(Suppl 10):936

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  7. Content type: Research

    The DNase I hypersensitive sites (DHSs) are associated with the cis-regulatory DNA elements. An efficient method of identifying DHSs can enhance the understanding on the accessibility of chromatin. Despite a m...

    Authors: Chuqiao Lyu, Lei Wang and Juhua Zhang

    Citation: BMC Genomics 2018 19(Suppl 10):905

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  8. Content type: Research

    One of the most common and recurrent vaginal infections is bacterial vaginosis (BV). The diagnosis is based on changes to the “normal” vaginal microbiome; however, the normal microbiome appears to differ accor...

    Authors: Hui-Mei Chen, Tzu-Hao Chang, Feng-Mao Lin, Chao Liang, Chih-Min Chiu, Tzu-Ling Yang, Ting Yang, Chia-Yen Huang, Yeong-Nan Cheng, Yi-An Chang, Po-Ya Chang and Shun-Long Weng

    Citation: BMC Genomics 2018 19(Suppl 10):876

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  9. Content type: Research

    Human gut microbiome has an essential role in human health and disease. Although the major dominant microbiota within individuals have been reported, the change of gut microbiome caused by external factors, su...

    Authors: Hui-Mei Chen, Chung-Chu Chen, Chien-Chi Chen, Shen-Chih Wang, Chun-Lin Wang, Chien-Hsun Huang, Jong-Shian Liou, Ta-Wei Liu, Hwei-Ling Peng, Feng-Mao Lin, Chia-Yuan Liu, Shun-Long Weng, Chieh-Jen Cheng, Yi-Fang Hung, Chii-Cherng Liao and Hsien-Da Huang

    Citation: BMC Genomics 2018 19(Suppl 10):904

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Portable peer review

The editors of BMC Genomics support initiatives that expedite the peer review process and are happy to consider manuscripts that have been reviewed in Peerage of Science. Please indicate in your cover letter if this applies to your manuscript.

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