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  1. White Striping (WS) and Wooden Breast (WB) pectoral myopathies are relevant disorders for contemporary broiler production worldwide. Several studies aimed to elucidate the genetic components associated with th...

    Authors: Mariane Spudeit Dal Pizzol, Adriana Mércia Guaratini Ibelli, Maurício Egídio Cantão, Francelly Geralda Campos, Haniel Cedraz de Oliveira, Jane de Oliveira Peixoto, Lana Teixeira Fernandes, Fernando de Castro Tavernari, Marcos Antônio Zanella Morés, Ana Paula Almeida Bastos and Mônica Corrêa Ledur
    Citation: BMC Genomics 2024 25:104
    Content type: Research Published on:

  2. The Ets domain transcription factors direct diverse biological processes throughout all metazoans and are implicated in development as well as in tumor initiation, progression and metastasis. The Drosophila Ets t...

    Authors: Komal Kumar Bollepogu Raja, Kelvin Yeung, Yoon-Kyung Shim and Graeme Mardon
    Citation: BMC Genomics 2024 25:103
    Content type: Research Published on:

  3. SPL transcription factors play vital roles in regulating plant growth, development, and abiotic stress responses. Sugar beet (Beta vulgaris L.), one of the world’s main sugar-producing crops, is a major source of...

    Authors: Guoxing Xue, Weijiao Wu, Yue Fan, Chao Ma, Ruiqi Xiong, Qing Bai, Xin Yao, Wenfeng Weng, Jianping Cheng and Jingjun Ruan
    Citation: BMC Genomics 2024 25:101
    Content type: Research Published on:

  4. Ovine footrot caused by Dichelobacter nodosus (D. nodosus) is a contagious disease with serious economic and welfare impacts in sheep production systems worldwide. A better understanding of the host genetic archi...

    Authors: Daniel Gaspar, Catarina Ginja, Nuno Carolino, Célia Leão, Helena Monteiro, Lino Tábuas, Sandra Branco, Ludovina Padre, Pedro Caetano, Ricardo Romão, Claudino Matos, António Marcos Ramos, Elisa Bettencourt and Ana Usié
    Citation: BMC Genomics 2024 25:100
    Content type: Research Published on:

    The Correction to this article has been published in BMC Genomics 2024 25:241

  5. Heat stress (HS) is an increasing threat for pig production with a wide range of impacts. When submitted to high temperatures, pigs will use a variety of strategies to alleviate the effect of HS. While systemi...

    Authors: Guilhem Huau, Laurence Liaubet, Jean-Luc Gourdine, Juliette Riquet and David Renaudeau
    Citation: BMC Genomics 2024 25:99
    Content type: Research Published on:

  6. Universal stress proteins (USPs) are a class of stress-induced proteins that play a crucial role in biotic and abiotic stress responses. These proteins have previously been reported to participate directly in ...

    Authors: Yunqing Li, Ao Zheng, Zhuang Li, Hu Wang, Jing Wang, Zhanghui Dong, Lina Yao, Xiao Han and Fei Wei
    Citation: BMC Genomics 2024 25:98
    Content type: Research Published on:

  8. Angelica sinensis (Danggui), a renowned medicinal orchid, has gained significant recognition for its therapeutic effects in treating a wide range of ailments. Genome information serves as a valuable resource, ena...

    Authors: Silan Wu, Lingling Da, Qiaoqiao Xiao, Qi Pan, Jinqiang Zhang and Jiaotong Yang
    Citation: BMC Genomics 2024 25:96
    Content type: Database Published on:

  9. Evolutionarily conserved in plants, the enzyme D-myo-inositol-3-phosphate synthase (MIPS; EC 5.5.1.4) regulates the initial, rate-limiting reaction in the phytic acid biosynthetic pathway. They are reported to be...

    Authors: Feba Jacob, Rasmieh Hamid, Zahra Ghorbanzadeh, Ravisankar Valsalan, Lavale Shivaji Ajinath and Deepu Mathew
    Citation: BMC Genomics 2024 25:95
    Content type: Research Published on:

  10. The cuttlefish, Sepia pharaonis, is characterized by rapid growth and strong disease resistance, making it an important commercially farmed cephalopod species in the southeastern coastal regions of China. However...

    Authors: Maowang Jiang, Qingxi Han, Liting Xu, Ruibing Peng, Tao Zhang and Xiamin Jiang
    Citation: BMC Genomics 2024 25:94
    Content type: Research Published on:

  11. Stayability, which may be defined as the probability of a cow remaining in the herd until a reference age or at a specific number of calvings, is usually measured late in the animal’s life. Thus, if used as se...

    Authors: Diogo Osmar Silva, Gerardo Alves Fernandes Júnior, Larissa Fernanda Simielli Fonseca, Lúcio Flávio Macedo Mota, Tiago Bresolin, Roberto Carvalheiro and Lucia Galvão de Albuquerque
    Citation: BMC Genomics 2024 25:93
    Content type: Research Published on:

    The Correction to this article has been published in BMC Genomics 2024 25:211

  12. Gorals Naemorhedus resemble both goats and antelopes, which prompts much debate about the intragenus species delimitation and phylogenetic status of the genus Naemorhedus within the subfamily Caprinae. Their evol...

    Authors: Nan Sun, Xiao-Ying Ma, Guang-Hong Shi, Xiao-Hong Yang, Wei Li, Chen-Guang Feng, Da Mi, Guo-Gang Li and Ji-Qi Lu
    Citation: BMC Genomics 2024 25:92
    Content type: Research Published on:

  13. Spodoptera litura is a harmful pest that feeds on more than 80 species of plants, and can be infected and killed by Spodoptera litura nucleopolyhedrovirus (SpltNPV). SpltNPV-C3 is a type C SpltNPV clone, that was...

    Authors: Weisong Gao, Xingjian Liu, Xintao Gao, Tong Wu, Shuang Wei, Zhifang Zhang, Huan Zhang and Yinü Li
    Citation: BMC Genomics 2024 25:91
    Content type: Research Published on:

  14. Hylurgus ligniperda, a major international forestry quarantine pest, was recently found to have invaded and posed a serious threat to the Pinus forests of the Jiaodong Peninsula in China. Continuous monitoring an...

    Authors: Chengjin Li, Buxin Wang, Yingchao Ji, Lan Huang, Xiaoyi Wang, Wenxia Zhao, Yanhong Wang, Hongyi Wang and Yanxia Yao
    Citation: BMC Genomics 2024 25:90
    Content type: Research Published on:

  16. As a key regulatory enzyme in the glycolysis pathway, pyruvate kinase (PK) plays crucial roles in multiple physiological processes during plant growth and is also involved in the abiotic stress response. Howev...

    Authors: Wei Liu, Yubin Wang, Yanwei Zhang, Wei Li, Caijie Wang, Ran Xu, Haiying Dai and Lifeng Zhang
    Citation: BMC Genomics 2024 25:88
    Content type: Research Published on:

  17. Buruli ulcer (BU) disease, caused by Mycobacterium ulcerans (MU), and characterized by necrotic ulcers is still a health problem in Africa and Australia. The genome of the bacterium has several pseudogenes due to...

    Authors: Edwin Sakyi Kyei-Baffour, Kwabena Owusu-Boateng, Abiola Isawumi and Lydia Mosi
    Citation: BMC Genomics 2024 25:87
    Content type: Research Published on:

  18. Comprehensive analysis of multi-omics data is crucial for accurately formulating effective treatment plans for complex diseases. Supervised ensemble methods have gained popularity in recent years for multi-omi...

    Authors: Jiahui Wang, Nanqing Liao, Xiaofei Du, Qingfeng Chen and Bizhong Wei
    Citation: BMC Genomics 2024 25:86
    Content type: Research Published on:

  19. Genomic heterozygosity has been shown to confer a health advantage in humans and play a protective role in complex diseases. Given osteoarthritis (OA) is a highly polygenic disease, we set out to determine if ...

    Authors: Robert Gill, Ming Liu, Guang Sun, Andrew Furey, Tim Spector, Proton Rahman and Guangju Zhai
    Citation: BMC Genomics 2024 25:85
    Content type: Research Published on:

  20. Venoms have evolved independently over a hundred times in the animal kingdom to deter predators and/or subdue prey. Venoms are cocktails of various secreted toxins, whose origin and diversification provide an ...

    Authors: Axel Touchard, Valentine Barassé, Jean-Michel Malgouyre, Michel Treilhou, Christophe Klopp and Elsa Bonnafé
    Citation: BMC Genomics 2024 25:84
    Content type: Research Published on:

  21. Protein phosphatases type 2C (PP2C) are heavily involved in plant growth and development, hormone-related signaling pathways and the response of various biotic and abiotic stresses. However, a comprehensive repor...

    Authors: Pan Zhang, Deqi Liu, Jiawei Ma, Chong Sun, Zhaofei Wang, Yongxing Zhu, Xuemei Zhang and Yiqing Liu
    Citation: BMC Genomics 2024 25:83
    Content type: Research Published on:

  22. Glucosidase II beta subunit (GluIIß), encoded from PRKCSH, is a subunit of the glucosidase II enzyme responsible for quality control of N-linked glycoprotein folding and suppression of GluIIß led to inhibitory ef...

    Authors: Worapong Khaodee, Guo Xiyuan, Moe Thi Thi Han, Chatchai Tayapiwatana, Sawitree Chiampanichayakul, Songyot Anuchapreeda and Ratchada Cressey
    Citation: BMC Genomics 2024 25:82
    Content type: Research Published on:

  23. The expression of biological traits is modulated by genetics as well as the environment, and the level of influence exerted by the latter may vary across characteristics. Photosynthetic traits in plants are co...

    Authors: Huiying Gong, Ziyang Zhou, Chenhao Bu, Deqiang Zhang, Qing Fang, Xiao-Yu Zhang and Yuepeng Song
    Citation: BMC Genomics 2024 25:81
    Content type: Research Published on:

  24. Hemocytes are immune cells that patrol the mosquito hemocoel and mediate critical cellular defense responses against pathogens. However, despite their importance, a comprehensive transcriptome of these cells w...

    Authors: Banhisikha Saha, Colton M McNinch, Stephen Lu, Margaret C.W. Ho, Stephanie Serafim De Carvalho and Carolina Barillas-Mury
    Citation: BMC Genomics 2024 25:80
    Content type: Research Published on:

  25. Drought poses a major threat to agricultural production and thus food security. Understanding the processes shaping plant responses to water deficit is essential for global food safety. Though many studies exa...

    Authors: Alina Klaus, Caroline Marcon and Frank Hochholdinger
    Citation: BMC Genomics 2024 25:79
    Content type: Research Published on:

  26. Local adaptation is a key evolutionary process that enhances the growth of plants in their native habitat compared to non-native habitats, resulting in patterns of adaptive genetic variation across the entire ...

    Authors: Joanna Meger, Bartosz Ulaszewski, Daniel J. Chmura and Jarosław Burczyk
    Citation: BMC Genomics 2024 25:78
    Content type: Research Published on:

  27. The Peruvian ‘chanque’ or Chilean ‘loco’ Concholepas concholepas is an economically, ecologically, and culturally important muricid gastropod heavily exploited by artisanal fisheries in the temperate southeastern...

    Authors: J. Antonio Baeza, M. Teresa González, Julia D. Sigwart, Carola Greve and Stacy Pirro
    Citation: BMC Genomics 2024 25:77
    Content type: Research Published on:

  29. We previously reported a modification of the CUT&Tag method (NTU-CAT) that allows genome-wide histone modification analysis in individual preimplantation embryos. In the present study, NTU-CAT was further simp...

    Authors: Yiren Zeng, Yoichiro Hoshino, Kazuki Susami, Shinnosuke Honda, Naojiro Minami and Shuntaro Ikeda
    Citation: BMC Genomics 2024 25:75
    Content type: Research Published on:

  30. Plant growth-regulating factors (GRFs) and GRF-interacting factors (GIFs) interact with each other and collectively have important regulatory roles in plant growth, development, and stress responses. Therefore...

    Authors: Xinghao Chen, Jun Zhang, Shijie Wang, Hongyu Cai, Minsheng Yang and Yan Dong
    Citation: BMC Genomics 2024 25:74
    Content type: Research Published on:

  31. Long noncoding RNAs (lncRNAs) are integral to a plethora of critical cellular biological processes, including the regulation of gene expression, cell differentiation, and the development of tumors and cancers....

    Authors: Guanghui Li, Peihao Bai, Cheng Liang and Jiawei Luo
    Citation: BMC Genomics 2024 25:73
    Content type: Research Published on:

  32. Temperature is an important environment factor that is critical to the survival and growth of crustaceans. However, the mechanisms by which crustaceans detect changes in temperature are still unclear. The tran...

    Authors: Yichen Qian, Qiaoling Yu, Jun Zhang, Yaoyao Han, Xi Xie and Dongfa Zhu
    Citation: BMC Genomics 2024 25:72
    Content type: Research Published on:

  33. Nonspecific orbital inflammation (NSOI) is an idiopathic, persistent, and proliferative inflammatory condition affecting the orbit, characterized by polymorphous lymphoid infiltration. Its pathogenesis and pro...

    Authors: Zixuan Wu, Na Li, Yuan Gao, Liyuan Cao, Xiaolei Yao and Qinghua Peng
    Citation: BMC Genomics 2024 25:71
    Content type: Research Published on:

    The Correction to this article has been published in BMC Genomics 2024 25:224

  34. Dorper and Tan sheep are renowned for their rapid growth and exceptional meat quality, respectively. Previous research has provided evidence of the impact of gut microbiota on breed characteristics. The precis...

    Authors: Yuhao Ma, Ganxian Cai, Jianfei Chen, Xue Yang, Guoying Hua, Deping Han, Xinhai Li, Dengzhen Feng and Xuemei Deng
    Citation: BMC Genomics 2024 25:70
    Content type: Research Published on:

  35. The yak is a symbol of the Qinghai-Tibet Plateau and provides important basic resources for human life on the plateau. Domestic yaks have been subjected to strong artificial selection and environmental pressur...

    Authors: Wei Peng, Changqi Fu, Shi Shu, Guowen Wang, Hui Wang, Binglin Yue, Ming Zhang, Xinrui Liu, Yaxin Liu, Jun Zhang, Jincheng Zhong and Jiabo Wang
    Citation: BMC Genomics 2024 25:69
    Content type: Research Published on:

  36. Costaceae, commonly known as the spiral ginger family, consists of approximately 120 species distributed in the tropical regions of South America, Africa, and Southeast Asia, of which some species have importa...

    Authors: Dong-Mei Li, Yan-Gu Pan, Hai-Lin Liu, Bo Yu, Dan Huang and Gen-Fa Zhu
    Citation: BMC Genomics 2024 25:68
    Content type: Research Published on:

  37. Rye (Secale cereale), one of the drought and cold-tolerant crops, is an important component of the Triticae Dumortier family of Gramineae plants. Basic helix-loop-helix (bHLH), an important family of transcriptio...

    Authors: Xingyu Chen, Caimei Yao, Jiahao Liu, Jintao Liu, Jingmei Fang, Hong Deng, Qian Yao, Tairan Kang and Xiaoqiang Guo
    Citation: BMC Genomics 2024 25:67
    Content type: Research Published on:

  38. The ongoing evolution of the Next Generation Sequencing (NGS) technologies has led to the production of genomic data on a massive scale. While tools for genomic data integration and analysis are becoming incre...

    Authors: Emile Mardoc, Mamadou Dia Sow, Sébastien Déjean and Jérôme Salse
    Citation: BMC Genomics 2024 25:66
    Content type: Research Published on:

  39. Pod shell thickness (PST) is an important agronomic trait of peanut because it affects the ability of shells to resist pest infestations and pathogen attacks, while also influencing the peanut shelling process...

    Authors: Hongfei Liu, Zheng Zheng, Ziqi Sun, Feiyan Qi, Juan Wang, Mengmeng Wang, Wenzhao Dong, Kailu Cui, Mingbo Zhao, Xiao Wang, Meng Zhang, Xiaohui Wu, Yue Wu, Dandan Luo, Bingyan Huang, Zhongxin Zhang…
    Citation: BMC Genomics 2024 25:65
    Content type: Research Published on:

  40. Largemouth bass (Micropterus salmoides) has significant economic value as a high-yielding fish species in China’s freshwater aquaculture industry. Determining the major genes related to growth traits and identify...

    Authors: Jixiang Hua, Chunyi Zhong, Wenhua Chen, Jianjun Fu, Jian Wang, Qingchun Wang, Geyan Zhu, Yan Li, Yifan Tao, Maoyou Zhang, Yalun Dong, Siqi Lu, Wenting Liu and Jun Qiang
    Citation: BMC Genomics 2024 25:64
    Content type: Research Published on:

  42. Vesicular stomatitis virus (VSV) is a typical non-segmented negative-sense RNA virus of the genus Vesiculovirus in the family Rhabdoviridae. VSV can infect a wide range of animals, including humans, with oral bli...

    Authors: Wuweiyi Han, Xiaojuan Fei, Fan Yang, Xintong Sun, Jianshe Yang, Jinxin Qiu, Luhua Zhang, Wenhui Zhang, Guohua Chen, Wei Han, Xiaobo He, Yongsheng Liu and Weike Li
    Citation: BMC Genomics 2024 25:62
    Content type: Research Published on:

  43. Sweetpotato is a typical ‘‘potassium (K+) favoring’’ food crop, which root differentiation process needs a large supply of potassium fertilizer and determine the final root yield. To further understand the regula...

    Authors: Rong Jin, Mengxiao Yan, Guanghua Li, Ming Liu, Peng Zhao, Zhe Zhang, Qiangqiang Zhang, Xiaoya Zhu, Jing Wang, Yongchao Yu, Aijun Zhang, Jun Yang and Zhonghou Tang
    Citation: BMC Genomics 2024 25:61
    Content type: Research Published on:

  44. Beyond the massive amounts of DNA and genes transferred from the protoorganelle genome to the nucleus during the endosymbiotic event that gave rise to the plastids, stretches of plastid DNA of varying size are...

    Authors: Juan Pablo Marczuk-Rojas, Angélica María Álamo-Sierra, Antonio Salmerón, Alfredo Alcayde, Viktor Isanbaev and Lorenzo Carretero-Paulet
    Citation: BMC Genomics 2024 25:60
    Content type: Research Published on:

  45. Central Michigan University (CMU) participated in a state-wide SARS-CoV-2 wastewater monitoring program since 2021. Wastewater samples were collected from on-campus sites and nine off-campus wastewater treatme...

    Authors: Michael J. Conway, Hannah Yang, Lauren A. Revord, Michael P. Novay, Rachel J. Lee, Avery S. Ward, Jackson D. Abel, Maggie R. Williams, Rebecca L. Uzarski and Elizabeth W. Alm
    Citation: BMC Genomics 2024 25:59
    Content type: Research Published on:

  46. Cytochrome P450 monooxygenases (CYP450s) play a crucial role in various biochemical reactions involved in the synthesis of antioxidants, pigments, structural polymers, and defense-related compounds in plants. ...

    Authors: Xiongjian Lin, Binquan Tang, Zhenqin Li, Lei Shi and Hongbo Zhu
    Citation: BMC Genomics 2024 25:58
    Content type: Research Published on:

  47. The disease caused by Riemerella anatipestifer (R. anatipestifer, RA) results in large economic losses to the global duck industry every year. Serovar-related genomic variation, such as the O-antigen and capsular...

    Authors: Zhishuang Yang, Xueqin Yang, Mingshu Wang, Renyong Jia, Shun Chen, Mafeng Liu, Xinxin Zhao, Qiao Yang, Ying Wu, Shaqiu Zhang, Juan Huang, Xumin Ou, Sai Mao, Qun Gao, Di Sun, Bin Tian…
    Citation: BMC Genomics 2024 25:57
    Content type: Research Published on:

  48. The genomes of species belonging to the genus Colletotrichum harbor a substantial number of cytochrome P450 monooxygenases (CYPs) encoded by a broad diversity of gene families. However, the biological role of the...

    Authors: Jossue Ortiz-Álvarez, Sioly Becerra, Riccardo Baroncelli, César Hernández-Rodríguez, Serenella A. Sukno and Michael R. Thon
    Citation: BMC Genomics 2024 25:56
    Content type: Research Published on:

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BMC Genomics

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