Figure 2

Single progeny and integrated maps for Chr. 2. (A) The most likely NF map was constructed for Chr. 2. The font name in red represents gene-based markers. The names of sites beginning with "FL," "S," and "NS" represent unreported markers, previously assigned markers, and neighboring markers, respectively. (B) The DC map for Chr. 2 was modified according to the likelihood generated by a previous data set [7]. As a result, the order from S0206 to S0209 was different from that in the previous report. In addition, four pairs of sites aligned by dotted lines reveal a consistency between the mapping results generated by original markers and their neighboring markers. (C) The final integrated linkage map for Chr. 2, in which the sites were named by a uniform format "S02XX," following the previous mapped sites in this chromosome. The neighboring markers (referred to as "NS02XX") are included in the box with their original sites. The NF, JL, and integrated maps for all of the chromosomes are listed in Figures S1, S2, and S3.