Table 10 Descriptive words for both the unidirectional and bidirectional promoter sets. The top 25 words that are correlated in the two promoter sets, according to their overrepresentation scores. The Words had to be overrepresented according to SlnSES with at least a score of 1.5. Shown are the words with a distance between -0.11 and 0.11.
From: Word-based characterization of promoters involved in human DNA repair pathways
Word | Unidirectional | Bidirectional | Distance |
|---|---|---|---|
CTTTGGCC | 2.08857 | 2.23024 | -0.100175818 |
AGGCAGGA | 1.51526 | 1.64780 | -0.093719933 |
CTCAGGAT | 1.58527 | 1.71375 | -0.090849079 |
GGGGGGAC | 1.61803 | 1.70814 | -0.063717392 |
CTTGCGGA | 1.65530 | 1.73350 | -0.055295750 |
CTGAGCAG | 1.99183 | 2.05890 | -0.047425652 |
GCCTGAGG | 1.99183 | 2.04796 | -0.039689904 |
TGAAGTGG | 1.61803 | 1.66175 | -0.030914708 |
GCCATCCG | 1.86393 | 1.89589 | -0.022599133 |
AGGTTGCA | 2.20477 | 2.23024 | -0.018010010 |
TCTGTGCC | 1.84096 | 1.85915 | -0.012862272 |
TACCACTA | 1.86393 | 1.88037 | -0.011624835 |
CAAAGAAT | 1.61803 | 1.61872 | -0.000487904 |
ACCGCTCA | 1.61803 | 1.61872 | -0.000487904 |
TATCTTAG | 1.61803 | 1.61872 | -0.000487904 |
AGAGTTCC | 1.62605 | 1.61872 | 0.005183093 |
GTCGGCTT | 1.90512 | 1.88037 | 0.017500893 |
CGCGCGCA | 1.94164 | 1.90263 | 0.027584236 |
CAGGCCAG | 1.95383 | 1.86972 | 0.059474751 |
ACAGAAAG | 2.79686 | 2.70295 | 0.066404398 |
GTCAGGAG | 2.40520 | 2.25776 | 0.104255824 |
GGAAGTGA | 1.96108 | 1.81095 | 0.106157941 |
TAGAGAGC | 1.99183 | 1.84125 | 0.106476139 |
TGCCAGGG | 1.75813 | 1.60511 | 0.108201480 |
GCACAAGC | 1.95383 | 1.80053 | 0.108399470 |
TTCACTTA | 2.15055 | 1.99725 | 0.108399470 |