Skip to main content

Table 3 CDS of bacteriophage origin in the sequenced genomes

From: Pyrosequencing-based comparative genome analysis of the nosocomial pathogen Enterococcus faecium and identification of a large transferable pathogenicity island

Strain Number of CDS of bacteriophage origina Number of genome-specific CDS of bacteriophage origina
E980 148 (5.2) 89 (3.1)
E1039 115 (4.4) 56 (2.2)
E1071 63 (2.3) 40 (1.5)
E1162 86 (3.2) 29 (1.1)
E1636 101 (3.4) 32 (1.1)
E1679 149 (4.9) 60 (2.0)
U0317 117 (3.9) 32 (1.1)
  1. aValues in brackets denote the percentage of CDS relative to the total number of CDS in the genome. A CDS was scored as unique for a specific genome when the encoded protein did not have a BLAST-hit with 90% amino acid identity or higher in any of the other sequenced isolates.