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Table 5 Overall function prediction statistics across all species combinations.

From: Combining modularity, conservation, and interactions of proteins significantly increases precision and coverage of protein function prediction

species

# terms

P

Rpp

# terms

P

Rpp

# terms

P

Rpp

rno

17430

0.50

0.12

9110

0.57

0.14

5738

0.75

0.20

mmu

26089

0.47

0.13

11441

0.59

0.16

5246

0.81

0.23

hsa

62833

0.44

0.14

22911

0.59

0.17

12317

0.76

0.39

dme

26155

0.56

0.19

19463

0.60

0.20

10455

0.75

0.30

cel

4098

0.52

0.14

1983

0.60

0.18

1332

0.71

0.24

sce

10666

0.66

0.23

9013

0.69

0.25

6335

0.81

0.35

  1. Total number of newly derived GO annotations and their estimated average precision (P) and per-protein recall (Rpp) for each species using low, medium and high similarity thresholds.
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BMC Genomics

ISSN: 1471-2164

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