Taylor DJ:Actinobacillus pleuropneumoniae. Diseases of Swine. Edited by: Straw BE. 2006, Ames: Iowa State University Press, 9,
Google Scholar
Bosse JT, Janson H, Sheehan BJ, Beddek AJ, Rycroft AN, Kroll JS, Langford PR: Actinobacillus pleuropneumoniae : pathobiology and pathogenesis of infection. Microbes Infect. 2002, 4 (2): 225-235. 10.1016/S1286-4579(01)01534-9.
Article
CAS
PubMed
Google Scholar
Dubreuil JD, Jacques M, Mittal KR, Gottschalk M: Actinobacillus pleuropneumoniae surface polysaccharides: their role in diagnosis and immunogenicity. Anim Health Res Rev. 2000, 1 (2): 73-93.
Article
CAS
PubMed
Google Scholar
Jacques M: Surface polysaccharides and iron-uptake systems of Actinobacillus pleuropneumoniae. Can J Vet Res. 2004, 68 (2): 81-85.
CAS
PubMed Central
PubMed
Google Scholar
Nicolet J:Actinobacillus pleuropneumoniae. Diseases of Swine. Edited by: Leman AD, Straw BE, Mengeling WL, D'Allaire S, Taylor DJ. 1992, Ames: Iowa State University,
Google Scholar
Kamp EM, Vermeulen TM, Smits MA, Haagsma J: Production of Apx toxins by field strains of Actinobacillus pleuropneumoniae and Actinobacillus suis. Infect Immun. 1994, 62 (9): 4063-4065.
CAS
PubMed Central
PubMed
Google Scholar
Nielsen R, Andresen LO, Plambeck T, Nielsen JP, Krarup LT, Jorsal SE: Serological characterization of Actinobacillus pleuropneumoniae biotype 2 strains isolated from pigs in two Danish herds. Vet Microbiol. 1997, 54 (1): 35-46. 10.1016/S0378-1135(96)01267-9.
Article
CAS
PubMed
Google Scholar
Kaplan JB, Mulks MH: Biofilm formation is prevalent among field isolates of Actinobacillus pleuropneumoniae. Vet Microbiol. 2005, 108 (1-2): 89-94. 10.1016/j.vetmic.2005.02.011.
Article
CAS
PubMed
Google Scholar
Auger E, Deslandes V, Ramjeet M, Contreras I, Nash JH, Harel J, Gottschalk M, Olivier M, Jacques M: Host-pathogen interactions of Actinobacillus pleuropneumoniae with porcine lung and tracheal epithelial cells. Infect Immun. 2009, 77 (4): 1426-1441. 10.1128/IAI.00297-08.
Article
CAS
PubMed Central
PubMed
Google Scholar
Baltes N, Buettner FF, Gerlach GF: Selective capture of transcribed sequences (SCOTS) of Actinobacillus pleuropneumoniae in the chronic stage of disease reveals an HlyX-regulated autotransporter protein. Vet Microbiol. 2007, 123 (1-3): 110-121. 10.1016/j.vetmic.2007.03.026.
Article
CAS
PubMed
Google Scholar
Ramjeet M, Deslandes V, Goure J, Jacques M: Actinobacillus pleuropneumoniae vaccines: from bacterins to new insights into vaccination strategies. Anim Health Res Rev. 2008, 9 (1): 25-45. 10.1017/S1466252307001338.
Article
PubMed
Google Scholar
Fuller TE, Shea RJ, Thacker BJ, Mulks MH: Identification of in vivo induced genes in Actinobacillus pleuropneumoniae. Microb Pathog. 1999, 27 (5): 311-327. 10.1006/mpat.1999.0309.
Article
CAS
PubMed
Google Scholar
Wagner TK, Mulks MH: A subset of Actinobacillus pleuropneumoniae in vivo induced promoters respond to branched-chain amino acid limitation. FEMS Immunol Med Microbiol. 2006, 48 (2): 192-204. 10.1111/j.1574-695X.2006.00147.x.
Article
CAS
PubMed
Google Scholar
Wagner TK, Mulks MH: Identification of the Actinobacillus pleuropneumoniae leucine-responsive regulatory protein and its involvement in the regulation of in vivo-induced genes. Infect Immun. 2007, 75 (1): 91-103. 10.1128/IAI.00120-06.
Article
CAS
PubMed Central
PubMed
Google Scholar
Fuller TE, Martin S, Teel JF, Alaniz GR, Kennedy MJ, Lowery DE: Identification of Actinobacillus pleuropneumoniae virulence genes using signature-tagged mutagenesis in a swine infection model. Microb Pathog. 2000, 29 (1): 39-51. 10.1006/mpat.2000.0364.
Article
CAS
PubMed
Google Scholar
Sheehan BJ, Bosse JT, Beddek AJ, Rycroft AN, Kroll JS, Langford PR: Identification of Actinobacillus pleuropneumoniae genes important for survival during infection in its natural host. Infect Immun. 2003, 71 (7): 3960-3970. 10.1128/IAI.71.7.3960-3970.2003.
Article
CAS
PubMed Central
PubMed
Google Scholar
Beddek AJ, Sheehan BJ, Bosse JT, Rycroft AN, Kroll JS, Langford PR: Two TonB systems in Actinobacillus pleuropneumoniae : their roles in iron acquisition and virulence. Infect Immun. 2004, 72 (2): 701-708. 10.1128/IAI.72.2.701-708.2004.
Article
CAS
PubMed Central
PubMed
Google Scholar
Baltes N, Gerlach GF: Identification of genes transcribed by Actinobacillus pleuropneumoniae in necrotic porcine lung tissue by using selective capture of transcribed sequences. Infect Immun. 2004, 72 (11): 6711-6716. 10.1128/IAI.72.11.6711-6716.2004.
Article
CAS
PubMed Central
PubMed
Google Scholar
Ali T, Oldfield NJ, Wooldridge KG, Turner DP, Ala'aldeen DA: Functional characterization of AasP, a maturation protease autotransporter protein of Actinobacillus pleuropneumoniae. Infect Immun. 2008, 76 (12): 5608-5614. 10.1128/IAI.00085-08.
Article
CAS
PubMed Central
PubMed
Google Scholar
Buettner FF, Bendalla IM, Bosse JT, Meens J, Nash JH, Hartig E, Langford PR, Gerlach GF: Analysis of the Actinobacillus pleuropneumoniae HlyX (FNR) regulon and identification of iron-regulated protein B as an essential virulence factor. Proteomics. 2009, 9 (9): 2383-2398. 10.1002/pmic.200800439.
Article
CAS
PubMed
Google Scholar
Hinton JC, Hautefort I, Eriksson S, Thompson A, Rhen M: Benefits and pitfalls of using microarrays to monitor bacterial gene expression during infection. Curr Opin Microbiol. 2004, 7 (3): 277-282. 10.1016/j.mib.2004.04.009.
Article
CAS
PubMed
Google Scholar
Larocque RC, Harris JB, Dziejman M, Li X, Khan AI, Faruque AS, Faruque SM, Nair GB, Ryan ET, Qadri F, Mekalanos JJ, Calderwood SB: Transcriptional profiling of Vibrio cholerae recovered directly from patient specimens during early and late stages of human infection. Infect Immun. 2005, 73 (8): 4488-4493. 10.1128/IAI.73.8.4488-4493.2005.
Article
CAS
PubMed Central
PubMed
Google Scholar
Son MS, Matthews WJ, Kang Y, Nguyen DT, Hoang TT: In vivo evidence of Pseudomonas aeruginosa nutrient acquisition and pathogenesis in the lungs of cystic fibrosis patients. Infect Immun. 2007, 75 (11): 5313-5324. 10.1128/IAI.01807-06.
Article
CAS
PubMed Central
PubMed
Google Scholar
Agarwal S, Sebastian S, Szmigielski B, Rice PA, Genco CA: Expression of the gonococcal global regulatory protein Fur and genes encompassing the Fur and iron regulon during in vitro and in vivo infection in women. J Bacteriol. 2008, 190 (9): 3129-3139. 10.1128/JB.01830-07.
Article
CAS
PubMed Central
PubMed
Google Scholar
Gouré J, Findlay WA, Deslandes V, Bouevitch A, Foote SJ, MacInnes JI, Coulton JW, Nash JH, Jacques M: Microarray-based comparative genomic profiling of reference strains and selected Canadian field isolates of Actinobacillus pleuropneumoniae. BMC Genomics. 2009, 10: 88-10.1186/1471-2164-10-88.
Article
PubMed Central
PubMed
Google Scholar
Planet PJ, Kachlany SC, Fine DH, DeSalle R, Figurski DH: The Widespread Colonization Island of Actinobacillus actinomycetemcomitans. Nat Genet. 2003, 34 (2): 193-198. 10.1038/ng1154.
Article
CAS
PubMed
Google Scholar
Seo SH, Goloubeva O, Webby R, Webster RG: Characterization of a porcine lung epithelial cell line suitable for influenza virus studies. J Virol. 2001, 75 (19): 9517-9525. 10.1128/JVI.75.19.9517-9525.2001.
Article
CAS
PubMed Central
PubMed
Google Scholar
Deslandes V, Nash JH, Harel J, Coulton JW, Jacques M: Transcriptional profiling of Actinobacillus pleuropneumoniae under iron-restricted conditions. BMC Genomics. 2007, 8: 72-10.1186/1471-2164-8-72.
Article
PubMed Central
PubMed
Google Scholar
Labrie J, Pelletier-Jacques G, Deslandes V, Ramjeet M, Auger E, Nash JH, Jacques M: Effects of growth conditions on biofilm formation by Actinobacillus pleuropneumoniae. Vet Res. 2010, 41 (1): 3-10.1051/vetres/2009051.
Article
PubMed
Google Scholar
Lone AG, Deslandes V, Nash JH, Jacques M, Macinnes JI: Modulation of gene expression in Actinobacillus pleuropneumoniae exposed to bronchoalveolar fluid. PLoS One. 2009, 4 (7): e6139-10.1371/journal.pone.0006139.
Article
PubMed Central
PubMed
Google Scholar
Schaller A, Kuhn R, Kuhnert P, Nicolet J, Anderson TJ, MacInnes JI, Segers RP, Frey J: Characterization of apxIVA, a new RTX determinant of Actinobacillus pleuropneumoniae. Microbiology. 1999, 145 (Pt 8): 2105-2116. 10.1099/13500872-145-8-2105.
Article
CAS
PubMed
Google Scholar
Cho WS, Chae C: Expression of the apxIV gene in pigs naturally infected with Actinobacillus pleuropneumoniae. J Comp Pathol. 2001, 125 (1): 34-40. 10.1053/jcpa.2001.0474.
Article
CAS
PubMed
Google Scholar
Cho WS, Chae C: PCR detection of Actinobacillus pleuropneumoniae apxIV gene in formalin-fixed, paraffin-embedded lung tissues and comparison with in situ hybridization. Lett Appl Microbiol. 2003, 37 (1): 56-60. 10.1046/j.1472-765X.2003.01347.x.
Article
CAS
PubMed
Google Scholar
Cho WS, Choi C, Chae C: In situ hybridization for the detection of the apxIV gene in the lungs of pigs experimentally infected with twelve Actinobacillus pleuropneumoniae serotypes. Vet Res. 2002, 33 (6): 653-660. 10.1051/vetres:2002046.
Article
CAS
PubMed
Google Scholar
Plumbridge J, Vimr E: Convergent pathways for utilization of the amino sugars N-acetylglucosamine, N-acetylmannosamine, and N-acetylneuraminic acid by Escherichia coli. J Bacteriol. 1999, 181 (1): 47-54.
CAS
PubMed Central
PubMed
Google Scholar
Krieger CJ, Zhang P, Mueller LA, Wang A, Paley S, Arnaud M, Pick J, Rhee SY, Karp PD: MetaCyc: a multiorganism database of metabolic pathways and enzymes. Nucleic Acids Res. 2004, D438-442. 10.1093/nar/gkh100. 32 Database
Salmon K, Hung SP, Mekjian K, Baldi P, Hatfield GW, Gunsalus RP: Global gene expression profiling in Escherichia coli K12. The effects of oxygen availability and FNR. J Biol Chem. 2003, 278 (32): 29837-29855. 10.1074/jbc.M213060200.
Article
CAS
PubMed
Google Scholar
Salmon KA, Hung SP, Steffen NR, Krupp R, Baldi P, Hatfield GW, Gunsalus RP: Global gene expression profiling in Escherichia coli K12: effects of oxygen availability and ArcA. J Biol Chem. 2005, 280 (15): 15084-15096. 10.1074/jbc.M414030200.
Article
CAS
PubMed
Google Scholar
Jishage M, Iwata A, Ueda S, Ishihama A: Regulation of RNA polymerase sigma subunit synthesis in Escherichia coli : intracellular levels of four species of sigma subunit under various growth conditions. J Bacteriol. 1996, 178 (18): 5447-5451.
CAS
PubMed Central
PubMed
Google Scholar
Escolar L, Perez-Martin J, de Lorenzo V: Opening the iron box: transcriptional metalloregulation by the Fur protein. J Bacteriol. 1999, 181 (20): 6223-6229.
CAS
PubMed Central
PubMed
Google Scholar
Andrews SC, Robinson AK, Rodriguez-Quinones F: Bacterial iron homeostasis. FEMS Microbiol Rev. 2003, 27 (2-3): 215-237. 10.1016/S0168-6445(03)00055-X.
Article
CAS
PubMed
Google Scholar
Ratledge C, Dover LG: Iron metabolism in pathogenic bacteria. Annu Rev Microbiol. 2000, 54: 881-941. 10.1146/annurev.micro.54.1.881.
Article
CAS
PubMed
Google Scholar
Moller T, Franch T, Hojrup P, Keene DR, Bachinger HP, Brennan RG, Valentin-Hansen P: Hfq: a bacterial Sm-like protein that mediates RNA-RNA interaction. Mol Cell. 2002, 9 (1): 23-30. 10.1016/S1097-2765(01)00436-1.
Article
CAS
PubMed
Google Scholar
Brennan RG, Link TM: Hfq structure, function and ligand binding. Curr Opin Microbiol. 2007, 10 (2): 125-133. 10.1016/j.mib.2007.03.015.
Article
CAS
PubMed
Google Scholar
Valentin-Hansen P, Eriksen M, Udesen C: The bacterial Sm-like protein Hfq: a key player in RNA transactions. Mol Microbiol. 2004, 51 (6): 1525-1533. 10.1111/j.1365-2958.2003.03935.x.
Article
CAS
PubMed
Google Scholar
Masse E, Salvail H, Desnoyers G, Arguin M: Small RNAs controlling iron metabolism. Curr Opin Microbiol. 2007, 10 (2): 140-145. 10.1016/j.mib.2007.03.013.
Article
CAS
PubMed
Google Scholar
Rioux S, Galarneau C, Harel J, Kobisch M, Frey J, Gottschalk M, Jacques M: Isolation and characterization of a capsule-deficient mutant of Actinobacillus pleuropneumoniae serotype 1. Microb Pathog. 2000, 28 (5): 279-289. 10.1006/mpat.1999.0347.
Article
CAS
PubMed
Google Scholar
Negrete-Abascal E, Garcia RM, Reyes ME, Godinez D, de la Garza M: Membrane vesicles released by Actinobacillus pleuropneumoniae contain proteases and Apx toxins. FEMS Microbiol Lett. 2000, 191 (1): 109-113. 10.1111/j.1574-6968.2000.tb09326.x.
Article
CAS
PubMed
Google Scholar
Boekema BK, Van Putten JP, Stockhofe-Zurwieden N, Smith HE: Host cell contact-induced transcription of the type IV fimbria gene cluster of Actinobacillus pleuropneumoniae. Infect Immun. 2004, 72 (2): 691-700. 10.1128/IAI.72.2.691-700.2004.
Article
CAS
PubMed Central
PubMed
Google Scholar
Pelicic V: Type IV pili: e pluribus unum?. Mol Microbiol. 2008, 68 (4): 827-837. 10.1111/j.1365-2958.2008.06197.x.
Article
CAS
PubMed
Google Scholar
Barnhart MM, Chapman MR: Curli biogenesis and function. Annu Rev Microbiol. 2006, 60: 131-147. 10.1146/annurev.micro.60.080805.142106.
Article
CAS
PubMed Central
PubMed
Google Scholar
Michael FS, Brisson JR, Larocque S, Monteiro M, Li J, Jacques M, Perry MB, Cox AD: Structural analysis of the lipopolysaccharide derived core oligosaccharides of Actinobacillus pleuropneumoniae serotypes 1, 2, 5a and the genome strain 5b. Carbohydr Res. 2004, 339 (11): 1973-1984. 10.1016/j.carres.2004.04.019.
Article
PubMed
Google Scholar
Altman E, Brisson JR, Perry MB: Structure of the capsular polysaccharide of Haemophilus pleuropneumoniae serotype 5. Eur J Biochem. 1987, 170 (1-2): 185-192. 10.1111/j.1432-1033.1987.tb13685.x.
Article
CAS
PubMed
Google Scholar
Ramjeet M, Cox AD, Hancock MA, Mourez M, Labrie J, Gottschalk M, Jacques M: Mutation in the LPS outer core biosynthesis gene, galU, affects LPS interaction with the RTX toxins ApxI and ApxII and cytolytic activity of Actinobacillus pleuropneumoniae serotype 1. Mol Microbiol. 2008, 70 (1): 221-235.
Article
CAS
PubMed
Google Scholar
Rioux S, Galarneau C, Harel J, Frey J, Nicolet J, Kobisch M, Dubreuil JD, Jacques M: Isolation and characterization of mini-Tn10 lipopolysaccharide mutants of Actinobacillus pleuropneumoniae serotype 1. Can J Microbiol. 1999, 45 (12): 1017-1026. 10.1139/cjm-45-12-1017.
Article
CAS
PubMed
Google Scholar
Boos W, Shuman H: Maltose/maltodextrin system of Escherichia coli : transport, metabolism, and regulation. Microbiol Mol Biol Rev. 1998, 62 (1): 204-229.
CAS
PubMed Central
PubMed
Google Scholar
Shelburne SA, Keith DB, Davenport MT, Horstmann N, Brennan RG, Musser JM: Molecular characterization of group A Streptococcus maltodextrin catabolism and its role in pharyngitis. Mol Microbiol. 2008, 69 (2): 436-452. 10.1111/j.1365-2958.2008.06290.x.
Article
CAS
PubMed Central
PubMed
Google Scholar
Shelburne SA, Sumby P, Sitkiewicz I, Okorafor N, Granville C, Patel P, Voyich J, Hull R, DeLeo FR, Musser JM: Maltodextrin utilization plays a key role in the ability of group A Streptococcus to colonize the oropharynx. Infect Immun. 2006, 74 (8): 4605-4614. 10.1128/IAI.00477-06.
Article
CAS
PubMed Central
PubMed
Google Scholar
Jones SA, Jorgensen M, Chowdhury FZ, Rodgers R, Hartline J, Leatham MP, Struve C, Krogfelt KA, Cohen PS, Conway T: Glycogen and maltose utilization by Escherichia coli O157:H7 in the mouse intestine. Infect Immun. 2008, 76 (6): 2531-2540. 10.1128/IAI.00096-08.
Article
CAS
PubMed Central
PubMed
Google Scholar
Zhang Z, Aboulwafa M, Smith MH, Saier MH: The ascorbate transporter of Escherichia coli. J Bacteriol. 2003, 185 (7): 2243-2250. 10.1128/JB.185.7.2243-2250.2003.
Article
CAS
PubMed Central
PubMed
Google Scholar
Jacobsen I, Hennig-Pauka I, Baltes N, Trost M, Gerlach GF: Enzymes involved in anaerobic respiration appear to play a role in Actinobacillus pleuropneumoniae virulence. Infect Immun. 2005, 73 (1): 226-234. 10.1128/IAI.73.1.226-234.2005.
Article
CAS
PubMed Central
PubMed
Google Scholar
Baltes N, N'Diaye M, Jacobsen ID, Maas A, Buettner FF, Gerlach GF: Deletion of the anaerobic regulator HlyX causes reduced colonization and persistence of Actinobacillus pleuropneumoniae in the porcine respiratory tract. Infect Immun. 2005, 73 (8): 4614-4619. 10.1128/IAI.73.8.4614-4619.2005.
Article
CAS
PubMed Central
PubMed
Google Scholar
Baltes N, Hennig-Pauka I, Jacobsen I, Gruber AD, Gerlach GF: Identification of dimethyl sulfoxide reductase in Actinobacillus pleuropneumoniae and its role in infection. Infect Immun. 2003, 71 (12): 6784-6792. 10.1128/IAI.71.12.6784-6792.2003.
Article
CAS
PubMed Central
PubMed
Google Scholar
Sargent F, Ballantine SP, Rugman PA, Palmer T, Boxer DH: Reassignment of the gene encoding the Escherichia coli hydrogenase 2 small subunit--identification of a soluble precursor of the small subunit in a hypB mutant. Eur J Biochem. 1998, 255 (3): 746-754. 10.1046/j.1432-1327.1998.2550746.x.
Article
CAS
PubMed
Google Scholar
Lamarche MG, Wanner BL, Crepin S, Harel J: The phosphate regulon and bacterial virulence: a regulatory network connecting phosphate homeostasis and pathogenesis. FEMS Microbiol Rev. 2008, 32 (3): 461-473. 10.1111/j.1574-6976.2008.00101.x.
Article
CAS
PubMed
Google Scholar
Lamarche MG, Dozois CM, Daigle F, Caza M, Curtiss R, Dubreuil JD, Harel J: Inactivation of the pst system reduces the virulence of an avian pathogenic Escherichia coli O78 strain. Infect Immun. 2005, 73 (7): 4138-4145. 10.1128/IAI.73.7.4138-4145.2005.
Article
CAS
PubMed Central
PubMed
Google Scholar
Buckles EL, Wang X, Lockatell CV, Johnson DE, Donnenberg MS: PhoU enhances the ability of extraintestinal pathogenic Escherichia coli strain CFT073 to colonize the murine urinary tract. Microbiology. 2006, 152 (Pt 1): 153-160. 10.1099/mic.0.28281-0.
Article
CAS
PubMed
Google Scholar
Nevesinjac AZ, Raivio TL: The Cpx envelope stress response affects expression of the type IV bundle-forming pili of enteropathogenic Escherichia coli. J Bacteriol. 2005, 187 (2): 672-686. 10.1128/JB.187.2.672-686.2005.
Article
CAS
PubMed Central
PubMed
Google Scholar
Hung DL, Raivio TL, Jones CH, Silhavy TJ, Hultgren SJ: Cpx signaling pathway monitors biogenesis and affects assembly and expression of P pili. EMBO J. 2001, 20 (7): 1508-1518. 10.1093/emboj/20.7.1508.
Article
CAS
PubMed Central
PubMed
Google Scholar
Jones CH, Danese PN, Pinkner JS, Silhavy TJ, Hultgren SJ: The chaperone-assisted membrane release and folding pathway is sensed by two signal transduction systems. EMBO J. 1997, 16 (21): 6394-6406. 10.1093/emboj/16.21.6394.
Article
CAS
PubMed Central
PubMed
Google Scholar
Chung JW, Ng-Thow-Hing C, Budman LI, Gibbs BF, Nash JH, Jacques M, Coulton JW: Outer membrane proteome of Actinobacillus pleuropneumoniae : LC-MS/MS analyses validate in silico predictions. Proteomics. 2007, 7 (11): 1854-1865. 10.1002/pmic.200600979.
Article
CAS
PubMed
Google Scholar
Arai H, Sato Y: Separation and characterization of two distinct hemagglutinins contained in purified leukocytosis-promoting factor from Bordetella pertussis. Biochim Biophys Acta. 1976, 444 (3): 765-782.
Article
CAS
PubMed
Google Scholar
Locht C, Antoine R, Jacob-Dubuisson F: Bordetella pertussis, molecular pathogenesis under multiple aspects. Curr Opin Microbiol. 2001, 4 (1): 82-89. 10.1016/S1369-5274(00)00169-7.
Article
CAS
PubMed
Google Scholar
Nicholson TL, Brockmeier SL, Loving CL: Contribution of Bordetella bronchiseptica Filamentous Hemagglutinin and Pertactin to Respiratory Disease in Swine. Infect Immun. 2009, 77 (5): 2136-2146. 10.1128/IAI.01379-08.
Article
CAS
PubMed Central
PubMed
Google Scholar
Sandal I, Shao JQ, Annadata S, Apicella MA, Boye M, Jensen TK, Saunders GK, Inzana TJ: Histophilus somni biofilm formation in cardiopulmonary tissue of the bovine host following respiratory challenge. Microbes Infect. 2009, 11 (2): 254-263. 10.1016/j.micinf.2008.11.011.
Article
CAS
PubMed
Google Scholar
CDC: Diphtheria, tetanus, and pertussis: recommendations for vaccine use and other preventive measures. Recommendations of the Immunization Practices Advisory committee (ACIP). MMWR Recomm Rep. 1991, 40 (RR-10): 1-28.
Google Scholar
CCAC: CCAC guidelines on: the care and use of farm animals in research, teaching and testing. 2009, Ottawa, ON: Canadian Council on Animal Care
Google Scholar
Bernstein JA, Khodursky AB, Lin PH, Lin-Chao S, Cohen SN: Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays. Proc Natl Acad Sci USA. 2002, 99 (15): 9697-9702. 10.1073/pnas.112318199.
Article
CAS
PubMed Central
PubMed
Google Scholar
Gene Expression Omnibus (GEO). [http://www.ncbi.nlm.nih.gov/geo/]
Saeed AI, Sharov V, White J, Li J, Liang W, Bhagabati N, Braisted J, Klapa M, Currier T, Thiagarajan M, Sturn A, Snuffin M, Rezantsev A, Popov D, Ryltsov A, Kostukovich E, Borisovsky I, Liu Z, Vinsavich A, Trush V, Quackenbush J: TM4: a free, open-source system for microarray data management and analysis. Biotechniques. 2003, 34 (2): 374-378.
CAS
PubMed
Google Scholar
Tusher VG, Tibshirani R, Chu G: Significance analysis of microarrays applied to the ionizing radiation response. Proc Natl Acad Sci USA. 2001, 98 (9): 5116-5121. 10.1073/pnas.091062498.
Article
CAS
PubMed Central
PubMed
Google Scholar
Peterson JD, Umayam LA, Dickinson T, Hickey EK, White O: The Comprehensive Microbial Resource. Nucleic Acids Res. 2001, 29 (1): 123-125. 10.1093/nar/29.1.123.
Article
CAS
PubMed Central
PubMed
Google Scholar
Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ: Basic local alignment search tool. J Mol Biol. 1990, 215 (3): 403-410.
Article
CAS
PubMed
Google Scholar
Huson DH, Richter DC, Rausch C, Dezulian T, Franz M, Rupp R: Dendroscope: An interactive viewer for large phylogenetic trees. BMC Bioinformatics. 2007, 8: 460-10.1186/1471-2105-8-460.
Article
PubMed Central
PubMed
Google Scholar
Rozen S, Skaletsky H: Primer3 on the WWW for general users and for biologist programmers. Methods Mol Biol. 2000, 132: 365-386.
CAS
PubMed
Google Scholar
Livak KJ, Schmittgen TD: Analysis of relative gene expression data using real-time quantitative PCR and the 2-DDCT Method. Methods. 2001, 25 (4): 402-408. 10.1006/meth.2001.1262.
Article
CAS
PubMed
Google Scholar