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Table 5 Pollen and flower development genes that were differentially expressed in both independently derived selfing genotypes of Eichhornia paniculata and were also identified from selfing Eichhornia paradoxa.

From: De novo sequence assembly and characterization of the floral transcriptome in cross- and self-fertilizing plants

Homolog name

Fold expression change1

2Gibberellin receptor (GID1c)

0.51****

2Peptide transport protein (PTR1)

0.62****

2ERECTA-like 1 (ERL1)

0.64*

2DICER-like1 dsrna-specific nuclease (DCL1)

0.77**

2Exocyst complex component (SEC5)

1.29*

2SHK1 binding protein 1 (SKB1)

1.38**

2REBELOTE (RBL)

1.64**

2Cellulose synthase (CSLD3)

0.55***

Pollen-pistil incompatibility 2 (POP2)

0.62****

ECERIFERUM 1 (CER1)

0.70***

Auxin signaling F-box 2 (AFB2)

0.71****

Transport inhibitor response 1 (TIR1)

0.89*

Beta-amylase (BAM1)

0.99****

Auxin response factor 8 (ARF8)

1.08****

PEPPER nucleic acid binding protein (PEP)

1.15**

Suppressor of FRIGIDA4 (SUF4)

1.18*

Phosphoglucose isomerase (PGI1)

1.35**

Auxin response factor 6 (ARF6)

1.50**

Regulatory particle non-atpase 10 (RPN10)

1.50*

Phosphatidylglycerolphosphate synthase 1 (PGP1)

1.60*

myb transcription factor (myb24)

1.79****

Glutaminyl-tRNA synthetase (OVA9)

1.93****

  1. * p < 0.05, ** p < 0.01, ***p < 0.001, ****p < 0.0001
  2. 1 Measured as the mean ratio of expression (FPKM) in each selfer relative to the outcrossing genotype
  3. 2 These genes were differentially expressed in the selfing genotypes of E. paniculata only
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BMC Genomics

ISSN: 1471-2164

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