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Table 3 Non-synonymous SNPs identified in BCG Mexico compared with BCG Pasteur 1173P2 and BCG Tokyo 172.

From: Genomic and proteomic analyses of Mycobacterium bovis BCG Mexico 1931 reveal a diverse immunogenic repertoire against tuberculosis infection

SNP Location1 Gene Change In comparison with BCG
1 39256 BCGMEX_0037c NS Pasteur
2 89198 BCGMEX_0084 NS Tokyo
3 338587 PE_PGRS4 NS Tokyo
4 535543 sigK NS Tokyo
5 562401 pcaA NS Tokyo
6 582595 regX3 NS Tokyo
7 585522 BCGMEX_0506c NS Tokyo and Pasteur
8 644544 BCGMEX_0568 NS Tokyo
9 739067 mmaA3 NS Tokyo
10 1165878 BCGMEX_1072c NS Tokyo
11 1294737 narJ NS Pasteur
12 1465719 BCGMEX_1346c NS Tokyo
13 1908146 PPE22 NS Pasteur
14 1987564 BCGMEX_1787c NA Pasteur
15 2171779 BCGMEX_1957 NS Tokyo and Pasteur
16 2261942 pks12 NS Pasteur
17 2268073 pks12 NS Pasteur
18 2599245 hrcA NS Tokyo
19 2625029 BCGMEX_2390 NA Tokyo and Pasteur
20 2637892 PE_PGRS41 NS Tokyo
21 2839572 BCGMEX_2587c NS Pasteur
22 3294834 ilvN NS Pasteur
23 3433045 PPE50 NS Tokyo
24 3433175 PPE50 NS Tokyo
25 3537078 BCGMEX_3256 NS Tokyo
26 3592845 BCGMEX_3305c NS Tokyo
27 3674969 sdhB NS Tokyo
28 3785919 BCGMEX_3469 NS Tokyo
29 4015927 hpt NS Tokyo
30 4059882 BCGMEX_3724 NA Pasteur
31 4069095 BCGMEX_3734 NS Tokyo
32 4075693 ponA2 NS Tokyo and Pasteur
33 4087843 BCGMEX_3752 NS Tokyo
  1. 1Locations and names of affected genes follow BCG Mexico 1931; bold text indicates previously reported SNPs; NS = non-synonymous; NA = not annotated